Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0405 ATGGCGGAAGAACATCGATGCCAAGCTCTGCGCCTATGCGCAAATAACTGCGGTTTCTTTGGCAGCCCGGCCACACAAAATCTATGCTCCAAATGCTACCGAGATTTGCAGCTCAAGGAGCAACAATCCTCCTCCGCCAAGCTGGTTCTCAATCAATCCCTAGTTCCTCCTCCATCTACCACCACGGAATCCGAACCCTCTTTCTCGGCGCCAGAACCTTCTTCTTCGGTTGCCATCGATCCAGCGGTGGAGGAGGCGAAGAGCGCATCGCCGGCGGCACAGACGAACAGGTGCTTGACGTGCAGGCGGCGCGTGGGTCTCACGGGGTTCAAGTGCCGGTGCGGGTTGACATTTTGCGGTTCCCACCGCTACCCGGAACAACACGGGTGCGAGTTCGACTTCAAGATGATGGGAAGAGAGCAGATCGCTAAGGCCAATCCTGTAGTGAAGGCGGAGAAATTGGAAAGGATCTGA 474 0.5612 MAEEHRCQALRLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLVPPPSTTTESEPSFSAPEPSSSVAIDPAVEEAKSASPAAQTNRCLTCRRRVGLTGFKCRCGLTFCGSHRYPEQHGCEFDFKMMGREQIAKANPVVKAEKLERI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0405 157 MobiDBLite consensus disorder prediction 48 74 - -
Sto12g0405 157 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Sto12g0405 157 SMART AN1_Zf_4 98 135 IPR000058 GO:0008270
Sto12g0405 157 MobiDBLite consensus disorder prediction 48 89 - -
Sto12g0405 157 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Sto12g0405 157 ProSiteProfiles Zinc finger AN1-type profile. 92 138 IPR000058 GO:0008270
Sto12g0405 157 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 157 - -
Sto12g0405 157 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 157 - -
Sto12g0405 157 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Sto12g0405 157 Gene3D - 1 67 - -
Sto12g0405 157 Gene3D - 72 153 IPR035896 -
Sto12g0405 157 SUPERFAMILY AN1-like Zinc finger 82 152 IPR035896 -
Sto12g0405 157 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Sto12g0405 157 Pfam AN1-like Zinc finger 100 134 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0405 Sto-Chr12 2584555 2585028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0405 1 157 C2H2 Transcription Factor Family AT3G52800 50.276 2.14e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0405 - - mesc:110625469 228.794