Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0399 ATGAAGTTTGAAGTAGCACTGCCATATTCCATGGCTACCACCACATTCACctatttcttcttctccttcactgttttattctctttcttttcgtTTCTGCTCTTCCTCTTTCGAATGAAGGCGTGTTGTAACTGCCACACTTGCCGAACCTACCTCACCTTCAGCTGGACTTCCCACTTCAACAACCTCTGCGATTGGTACACTCATCTCCTTCGCAACTCACCCACCGGAACCATCCACGTCCACGCTCTTGCCAACACCATCACCGCCAACCCCGACAACGTCCACCACATCCTCAAGACCCGCTTCCACAACTACCCCAAGGGCAAGCCCTTCTCCGCCATCCTCGGCGATCTTCTCGGCCAAGGGATCTTCAACGTCGACGGCCACGCCTGGATGTTCCAACGCAAAATGGCCAGCCTCGAGCTGGGAAGCGTCGCGATTCGATCCTACGCGCTCGACATTGTTACTCGCGAGATCCAATCACGCCTCCTTCCCATACTCGCTGCCAACGACGCCGTTTTGGACTTGCAAGACATCCTCCGCAGGTTCTCCTTTGACAACATTTGCAATTTCTCGTTCGGGTTGGACCCGGGTTGTCTCCACCCGTCCCTGCCCGTTTCGCCTCTCGCCCAAGCCTTCGACCAGGCCTCCAGGCTATCCGCGGAGAGGGCCATGATGGCGTCACCGTTGATTTGGAAGGTGAAGCGACTTCTGAACGTAGGATCTGAGAAGAAATTGAAGGAAGCGATTCGAGTGGTGAATGATTTAGCGGAGGGGTTGATCAAGCAGAGACGCGAGATGGGGTATTCTACCAGGAAAGACCTTCTCTCGAGGTTCATGAGCTCCATCAGCGACAACGACGCCTATCTCAGAGACATCGTCGTTAGTTTTCTTTTGGCTGGTCGTGACACCGTGGCAGCCGCGTTGACCGGCTTCTTTTGGCTGTTATCAAGAAACGGGCGCGTCCAGTCACGGATCCGGGAGGAGCTGGACCGTTTCATGGGACCCGATGAGGAGATTGCCAGTTTTCACCAGTTGCGAGAAATGCATTACTTAAACGCCGCCGTTTACGAGAGCATGAGGCTGTACCCGCCGGTTCAGTTCGATTCCAAGTTCGCGGCAGAGGATGATGTGTTACCGGACGGCACGTTTATAAGGAAGGGTACTAGGGTCACCTACCACCCGTATGCAATGGGTCGGATGGAGCGTATATGGGGCCCCGATTGTCTTGAGTTCAGGCCCGAGAGGTGGTTGCAGGACGGCGTGTTTCTGCCGGAGTGCCCGTTTAAGTACCCGGTTTTTCAGGCTGGGCccagggtttgtttgggaaagGAATTGGCTTTGGTGGAGATGAAATCTGTGGTGGCTGCCTTGGTCCGACGCTTTGATATCCGGGTTGTGGGGTCCAACTCGGAGCCTCGGTTCGTCCCGGGTCTCACTGCCACAGTCAGAGGCGGTATGCCGGTTCGGGTGAGTGAAAGAAGACGTTGA 1494 0.5315 MKFEVALPYSMATTTFTYFFFSFTVLFSFFSFLLFLFRMKACCNCHTCRTYLTFSWTSHFNNLCDWYTHLLRNSPTGTIHVHALANTITANPDNVHHILKTRFHNYPKGKPFSAILGDLLGQGIFNVDGHAWMFQRKMASLELGSVAIRSYALDIVTREIQSRLLPILAANDAVLDLQDILRRFSFDNICNFSFGLDPGCLHPSLPVSPLAQAFDQASRLSAERAMMASPLIWKVKRLLNVGSEKKLKEAIRVVNDLAEGLIKQRREMGYSTRKDLLSRFMSSISDNDAYLRDIVVSFLLAGRDTVAAALTGFFWLLSRNGRVQSRIREELDRFMGPDEEIASFHQLREMHYLNAAVYESMRLYPPVQFDSKFAAEDDVLPDGTFIRKGTRVTYHPYAMGRMERIWGPDCLEFRPERWLQDGVFLPECPFKYPVFQAGPRVCLGKELALVEMKSVVAALVRRFDIRVVGSNSEPRFVPGLTATVRGGMPVRVSERRR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0399 497 PANTHER CYTOCHROME P450 94C1 18 494 - -
Sto12g0399 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 Pfam Cytochrome P450 78 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 SUPERFAMILY Cytochrome P450 61 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto12g0399 497 PANTHER CYTOCHROME P450 18 494 - -
Sto12g0399 497 Gene3D Cytochrome P450 53 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0399 Sto-Chr12 2532361 2533854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0399 33 495 Cytochrome P450 AT2G27690 63.848 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0399 K20624 - gmx:100813091 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0399 12 2532361 2533854 Sto12g0399 12 2532361 2533854 ECH
Sto12g0399 12 2532361 2533854 Sto7g0798 7 5930794 5932191 ECH