Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0396 ATGGCGTCTTCTACCACATCCTCTGCCTCTGACACCGAGACAAAGCCATTCTCTGTGCTCTTTGTGTGCCTTGGCAACATCTGTAGGAGCCCGGCTGCTGAAGGGGTTTTCAGAGACTTGGTCAAGAGAAGGGCTTTGGATTCTAAGTTCAAAATTGATTCTGCCGGCACCATCAATTACCATGAGGGAAATGAAGCAGACCCGAGAATGAGAGCAGCCTCAAAAAGGCGGGGAATTGAGATAACCTCTATTTCTAGGCCAATCCAGCCGTCTGATTTCAAAGATTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGAGGACATATTGGAGGCATTCAATAGATGGAAATTTAGAGATCCTTTACCAGCTGATGCACATAAAAAGGTTAAATTGATGTGCTCCTATTGTAAGAAACATGATGAAACTGAAGTCCCTGATCCTTACTATGGTGGACCACAAGGTTTTGAGAAGGAGAGCATAAACATTTACAAGAACAATAAGAGGAGTAAGTTGGTCATCCTGCAGAAAATTAGAGTGGCACCTATAGGCCACTTATCTTCTGATATCCGCCTCTCAGCAACTTGGACTGCCTTCAAAGCAATCTCTGGTCTGTTCATCTTAATGCATGCAACACTGATCCGTCTTCAGGAGCAAGCATCTCACGAGCGCACAGTAATGCCGAGTAAAACAGTGCCTACAAATAAGGCATTGATTGTTAACACTAGACAAGAAGAGGAGAGTAGAGATCAGAGGAATAAGTTTCTAACTGGAAAGGGCGAGGAAAAATCTCTGATAAAACGTGCCGCACAGAAACTGAGGAGGCCATGGAGTGAATTTGAATTGGATGGCCTTCAACGCATGAAAACTGCCTCCGGGTTGAGTATTAGAGAAAAAACAAAGGAAGAATACAAGGATTTTAACTTGGTTCCTGGAAACCTGAGGATAGCAAAACACATTTCGCGCCAGAGAATTGAAGAGAGAGATCAGTTGGAGAAATCGTACCTGTAA 1014 0.4339 MASSTTSSASDTETKPFSVLFVCLGNICRSPAAEGVFRDLVKRRALDSKFKIDSAGTINYHEGNEADPRMRAASKRRGIEITSISRPIQPSDFKDFDLILAMDKQNREDILEAFNRWKFRDPLPADAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKESINIYKNNKRSKLVILQKIRVAPIGHLSSDIRLSATWTAFKAISGLFILMHATLIRLQEQASHERTVMPSKTVPTNKALIVNTRQEEESRDQRNKFLTGKGEEKSLIKRAAQKLRRPWSEFELDGLQRMKTASGLSIREKTKEEYKDFNLVPGNLRIAKHISRQRIEERDQLEKSYL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0396 337 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 3 159 - -
Sto12g0396 337 CDD LMWPTP 18 159 - -
Sto12g0396 337 SUPERFAMILY Phosphotyrosine protein phosphatases I 15 159 IPR036196 -
Sto12g0396 337 PRINTS LMW phosphotyrosine protein phosphatase signature 19 36 IPR017867 GO:0004725|GO:0006470
Sto12g0396 337 PRINTS LMW phosphotyrosine protein phosphatase signature 62 78 IPR017867 GO:0004725|GO:0006470
Sto12g0396 337 PRINTS LMW phosphotyrosine protein phosphatase signature 95 110 IPR017867 GO:0004725|GO:0006470
Sto12g0396 337 SMART LMWPc_2 17 177 IPR023485 -
Sto12g0396 337 Pfam Low molecular weight phosphotyrosine protein phosphatase 19 164 IPR023485 -
Sto12g0396 337 Gene3D - 1 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0396 4 159 Protein tyrosine phosphatase (PTP) family AT3G44620 65.922 8.21e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0396 K25307 - tcc:18590368 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0396 12 2509240 2514528 Sto12g0396 12 2509240 2514528 ECH