Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0371 ATGGCTTTAGCTTGGCCTCACCTGCTGCTTTTTCGTTCACAATCTTCGATCCCGGCCTCCAACTACTTCTTTTTCTCCGATCTTCCTGATTCTCGCTCCGTTGAAACGCTATGGCCGACTCCTTTGACTCTAGTCCGCCGGAGCAACATCTCCCTCCTGTCCCCGCCTACTTTAATGTCCAGATTCAAATGCTTAAGAAAATCGACGGAAGATAAGCACCAGATTTCTGTAGCTACCAATGGTCGGGTTGGGTCACTTTCGCAGAGAATTGCGACCACTTCGGCTGGCGATTCTGTCTCTTTAGGAATTCGAGAACCGGTTTATGAGGTTGTAGAAGTGAAGTCAGATGGGACGGTATCAACCAGAAAAATCAACAGGAGACAACTATTGAAGTTAAGCGGTCTTCGTCCAAGAGATATTCGAAGCGTGGATCCATcattatttttgacaaattcAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATTCTTCTAAATCTGGGATCATTGCGAGCAATAGCAATGCAAGAGCGTGTACTTATTTTTGATTATAATCGTAAAGGAGGGAAAGCTTTTCTAGAGTCATTGCTGCCTCGGCTGAACCCCAAGAACAACAATGGTGGTCCTTCTATGCCATTTGAGCTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGGTTAGAGCAGAGACTAATGGACTTAGAACCTCGTGTTCAAGCACTTCTCGAGGCCTTGCCAAACCGAATAACTGGTGACATTTTGGAACAACTTCGTACAAGCAAACAAACTTTGGTAGAGTTGGGTTCCAGGGCAGGAGCTCTCAGACAAATGCTACTTGATCTTCTAGAGGACCCTCATGAAATACGTCGTATATGTATTATGGGAAGAAATTGCACACTTAGAAAGGGAAGTGATGATGTGGAGTGTTCACTGCCCTCAGAAAAGCAGATTGCTGAGGaggaggaggaagaaattGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGCTCACGGAGGCTTGAGGTTAGCAGAGTAGAACTGCTTCTTCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTAGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTCGAAGAACATGTGTTCGCATTTTGGCTGACAACAGCTGGGATTATTGTTGGTGCGGTTATTGGTTTTTTTCTCATGTATTACTATCTCAAGGCAAGAAAAATACTTTGA 1314 0.433 MALAWPHLLLFRSQSSIPASNYFFFSDLPDSRSVETLWPTPLTLVRRSNISLLSPPTLMSRFKCLRKSTEDKHQISVATNGRVGSLSQRIATTSAGDSVSLGIREPVYEVVEVKSDGTVSTRKINRRQLLKLSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQERVLIFDYNRKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRITGDILEQLRTSKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLRKGSDDVECSLPSEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVIGFFLMYYYLKARKIL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0371 437 Gene3D Magnesium transport protein CorA, transmembrane region 185 368 - -
Sto12g0371 437 Coils Coil 226 246 - -
Sto12g0371 437 Coils Coil 313 337 - -
Sto12g0371 437 Gene3D - 103 184 - -
Sto12g0371 437 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 68 437 IPR039204 -
Sto12g0371 437 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 373 428 IPR045863 -
Sto12g0371 437 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 68 437 - -
Sto12g0371 437 CDD Mrs2_Mfm1p-like 110 436 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0371 Sto-Chr12 2334741 2340354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0371 101 437 MRS2 Gene Family AT5G22830 84.570 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0371 K16075 - gmx:100808371 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0371 12 2334741 2340354 Sto12g0371 12 2334741 2340354 ECH