Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto12g0369 | ATGGCGGAGGACCGGAATGACGATATGAGTGAGTCTAGTGATTACAGTTCAGAGGACGAAGGGACCGAGGAATACAGGCGGGGAGGATATCATGCCGTTCGAATTGGGGAGACGTTCAAAAATGGGTGCTATGTGGTGCAGAGGAAGCTTGGCTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATACGCGGAGATCGTGTTATGTAGCCCTAAAAATTCAAAAGAGTGCTCAGCACTACACTGAAGCTGCGATAGATGAAATAAAGATTCTCAAGCAGATTGCTGAAGGGGACCCGGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGGCCCAATGGCCAGCATGTGTGTATGGTTTTTGAATTCCTAGGTGACAATCTTCTGACTGTTATCAAGTATAGTGATTATCAAGGGATTCCTCTCTCCATGGTTAAAGAAATTTGTTTCCATATTTTGGTGGGATTGGATTACTTGCATCGTGAGCTATCTGTAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTCCTGTCAACGATAGATCCATCTAAGGATCCTAGAAAATCCAGTTCTTCACTTATCCTTCCAAACACCAAGGATAATGCTGTGTCAAAAAATGGGACcactaaagaaaacaatatttCAAATGGAGATCTGACAAAAAATCAGAAAAAGAAATTGCGGAAAAAGGCTAAGAAGGCAGCTCAAAGTTGTGTTGAGAAGGAAAGTCCGAAGGAAGGCGAGGAGGATTCTAAACCGCTTGGCCTTGATGATTGTAGTGATAATGTAAAGTCAATCACAGAATCTGTTGAAAATAAACCTAATGGTCCTGTGAGTAAAGCTGAACCAATAGAGGTTGTTGAAACTAAGGACATTCCAGATTGTAGTCAGGGGCAACGAAAAGTTAGCCGCACCATGAGAAAGAAGTTACTTTCAGCTGTTGATCTTAAATGTAAGCTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTATTGGATCTAAATATTCAACTCCGGCTGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGATTTCCACTGGGGATGTTCTTTTTGATCCTCACAGTAGTGACAACTATGAGAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAGTGATGCCTCGCAAGATTGCACTAGGTGGCCGTTTTTCTcgagatttttttaatagatatgGTGATTTGAAGCACATCCGCCGGTTGCGCTTCTGGCCTCTTAATAAGGTGCTAATGGAGAAGTATGATTTCAGTGAGCAAGATGCAAATGACATGGCTGATTTCCTTGTTCCCTTACTCGATTTTGCCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCAGTGCAGGTCCTCGGATTCTTGAGCCCTCAATGACCGCTGTCCAAACTATGGCCACAGACACAGAAACATCTGAAAAGACGAAGGGAAAGGCTGAGCTGGACGCAGTGGAAGTTGGTGTGGGGAATATGACCATCGAGTCTCAATCTATATAG | 1608 | 0.4248 | MAEDRNDDMSESSDYSSEDEGTEEYRRGGYHAVRIGETFKNGCYVVQRKLGWGHFSTVWLAWDTRRSCYVALKIQKSAQHYTEAAIDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTVIKYSDYQGIPLSMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSTIDPSKDPRKSSSSLILPNTKDNAVSKNGTTKENNISNGDLTKNQKKKLRKKAKKAAQSCVEKESPKEGEEDSKPLGLDDCSDNVKSITESVENKPNGPVSKAEPIEVVETKDIPDCSQGQRKVSRTMRKKLLSAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVIIGSKYSTPADLWSFACICFEISTGDVLFDPHSSDNYERDEDHLALMMELLGVMPRKIALGGRFSRDFFNRYGDLKHIRRLRFWPLNKVLMEKYDFSEQDANDMADFLVPLLDFAPEKRPTAAQCLNHPWISAGPRILEPSMTAVQTMATDTETSEKTKGKAELDAVEVGVGNMTIESQSI | 535 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto12g0369 | 535 | PANTHER | SERINE KINASE-LIKE PROTEIN | 11 | 534 | - | - | |
Sto12g0369 | 535 | MobiDBLite | consensus disorder prediction | 240 | 264 | - | - | |
Sto12g0369 | 535 | ProSiteProfiles | Protein kinase domain profile. | 44 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto12g0369 | 535 | CDD | STKc_SRPK | 33 | 485 | - | - | |
Sto12g0369 | 535 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 534 | - | - | |
Sto12g0369 | 535 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 486 | - | - | |
Sto12g0369 | 535 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 126 | - | - | |
Sto12g0369 | 535 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 73 | IPR017441 | GO:0005524 | |
Sto12g0369 | 535 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 171 | 183 | IPR008271 | GO:0004672|GO:0006468 | |
Sto12g0369 | 535 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Sto12g0369 | 535 | SMART | serkin_6 | 44 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto12g0369 | 535 | MobiDBLite | consensus disorder prediction | 190 | 227 | - | - | |
Sto12g0369 | 535 | Pfam | Protein kinase domain | 44 | 184 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto12g0369 | 535 | Pfam | Protein kinase domain | 322 | 485 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto12g0369 | 535 | MobiDBLite | consensus disorder prediction | 187 | 265 | - | - | |
Sto12g0369 | 535 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 499 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto12g0369 | Sto-Chr12 | 2330181 | 2333424 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto12g0369 | 1 | 531 | EF-hand Containing Proteins | AT5G22840 | 66.236 | 0.0 | 705 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Sto12g0369 | Pkinase | 1.4e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto12g0369 | K08832 | - | gmx:100791829 | 833.943 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto7g0849 | 7 | 6428495 | 6431365 | Sto12g0369 | 12 | 2330181 | 2333424 | CCT | |
Sto12g0369 | 12 | 2330181 | 2333424 | Sto12g0369 | 12 | 2330181 | 2333424 | ECH |