Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0369 ATGGCGGAGGACCGGAATGACGATATGAGTGAGTCTAGTGATTACAGTTCAGAGGACGAAGGGACCGAGGAATACAGGCGGGGAGGATATCATGCCGTTCGAATTGGGGAGACGTTCAAAAATGGGTGCTATGTGGTGCAGAGGAAGCTTGGCTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATACGCGGAGATCGTGTTATGTAGCCCTAAAAATTCAAAAGAGTGCTCAGCACTACACTGAAGCTGCGATAGATGAAATAAAGATTCTCAAGCAGATTGCTGAAGGGGACCCGGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGGCCCAATGGCCAGCATGTGTGTATGGTTTTTGAATTCCTAGGTGACAATCTTCTGACTGTTATCAAGTATAGTGATTATCAAGGGATTCCTCTCTCCATGGTTAAAGAAATTTGTTTCCATATTTTGGTGGGATTGGATTACTTGCATCGTGAGCTATCTGTAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTCCTGTCAACGATAGATCCATCTAAGGATCCTAGAAAATCCAGTTCTTCACTTATCCTTCCAAACACCAAGGATAATGCTGTGTCAAAAAATGGGACcactaaagaaaacaatatttCAAATGGAGATCTGACAAAAAATCAGAAAAAGAAATTGCGGAAAAAGGCTAAGAAGGCAGCTCAAAGTTGTGTTGAGAAGGAAAGTCCGAAGGAAGGCGAGGAGGATTCTAAACCGCTTGGCCTTGATGATTGTAGTGATAATGTAAAGTCAATCACAGAATCTGTTGAAAATAAACCTAATGGTCCTGTGAGTAAAGCTGAACCAATAGAGGTTGTTGAAACTAAGGACATTCCAGATTGTAGTCAGGGGCAACGAAAAGTTAGCCGCACCATGAGAAAGAAGTTACTTTCAGCTGTTGATCTTAAATGTAAGCTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTATTGGATCTAAATATTCAACTCCGGCTGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGATTTCCACTGGGGATGTTCTTTTTGATCCTCACAGTAGTGACAACTATGAGAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAGTGATGCCTCGCAAGATTGCACTAGGTGGCCGTTTTTCTcgagatttttttaatagatatgGTGATTTGAAGCACATCCGCCGGTTGCGCTTCTGGCCTCTTAATAAGGTGCTAATGGAGAAGTATGATTTCAGTGAGCAAGATGCAAATGACATGGCTGATTTCCTTGTTCCCTTACTCGATTTTGCCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCAGTGCAGGTCCTCGGATTCTTGAGCCCTCAATGACCGCTGTCCAAACTATGGCCACAGACACAGAAACATCTGAAAAGACGAAGGGAAAGGCTGAGCTGGACGCAGTGGAAGTTGGTGTGGGGAATATGACCATCGAGTCTCAATCTATATAG 1608 0.4248 MAEDRNDDMSESSDYSSEDEGTEEYRRGGYHAVRIGETFKNGCYVVQRKLGWGHFSTVWLAWDTRRSCYVALKIQKSAQHYTEAAIDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTVIKYSDYQGIPLSMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSTIDPSKDPRKSSSSLILPNTKDNAVSKNGTTKENNISNGDLTKNQKKKLRKKAKKAAQSCVEKESPKEGEEDSKPLGLDDCSDNVKSITESVENKPNGPVSKAEPIEVVETKDIPDCSQGQRKVSRTMRKKLLSAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVIIGSKYSTPADLWSFACICFEISTGDVLFDPHSSDNYERDEDHLALMMELLGVMPRKIALGGRFSRDFFNRYGDLKHIRRLRFWPLNKVLMEKYDFSEQDANDMADFLVPLLDFAPEKRPTAAQCLNHPWISAGPRILEPSMTAVQTMATDTETSEKTKGKAELDAVEVGVGNMTIESQSI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0369 535 PANTHER SERINE KINASE-LIKE PROTEIN 11 534 - -
Sto12g0369 535 MobiDBLite consensus disorder prediction 240 264 - -
Sto12g0369 535 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0369 535 CDD STKc_SRPK 33 485 - -
Sto12g0369 535 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 534 - -
Sto12g0369 535 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Sto12g0369 535 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Sto12g0369 535 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Sto12g0369 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Sto12g0369 535 MobiDBLite consensus disorder prediction 1 23 - -
Sto12g0369 535 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0369 535 MobiDBLite consensus disorder prediction 190 227 - -
Sto12g0369 535 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0369 535 Pfam Protein kinase domain 322 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0369 535 MobiDBLite consensus disorder prediction 187 265 - -
Sto12g0369 535 SUPERFAMILY Protein kinase-like (PK-like) 39 499 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0369 Sto-Chr12 2330181 2333424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0369 1 531 EF-hand Containing Proteins AT5G22840 66.236 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Sto12g0369 Pkinase 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0369 K08832 - gmx:100791829 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0849 7 6428495 6431365 Sto12g0369 12 2330181 2333424 CCT
Sto12g0369 12 2330181 2333424 Sto12g0369 12 2330181 2333424 ECH