Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0359 ATGGCGAACGGTAAGGATTCCGACGAGTTTGTGGTGTTATCGCGGGTCCGGACCGGCCTCAAGAGGGAGTTTGCATTCGCCATGAAAGCTCAATCCGAGATCTGTGGATCTTTAGGTCGGACCCGTGCCAGCAAGAACCGGAATGGGGTCCAGGATAGTCCGAGCACCAAGAGGTCTAAGAAGTCTGGTTCGTCAGGGGCTAAGAACGATGAGCAGAATGGTCCGAAACCGGTGTCGAAAGATGTGGTAGAACCGATAAATTTTGAAGAGGTGAAGGGAAAGGAGGTAAAGGCCGTGGATGATATGGATGATGTTATGAGCGAGGAGGAGGCAAAAAGCGACGTGGTGGACCTCTCTGGCGACGACGAACCCAAGAACCTAGTGGGGGAGTCGATGGCTAATAGGGAGCCTATGGATGAGGCTGCAGTGCCCATTTGTGAAGAGGAACCCAAGAGCGATGTTGTAGAAAATGTGAGCGACGATGAACCCAAAAGTAGTCCTATGTTAGAGTCTTCGAAGGAAGGGTCAATGAATGATATGGGGCAAGCCATTTGCCAAGTCGCGGACAAGGAAAATCAATCGAATGAAGAAAATTTGCAGAAGCCCTTGACATCCAATATCTTGATGAGTGGAGAGACATGTTCTTCAAAGGCAAAAGGTATTGATGAAACAACCCCTGCTTCTGTTAATGGTGACTTCAAGGCGAAGGCCTTGATGGAGAAGCCACCAAGGCGGTTTACGCGGTCAGTACTGAAACAAAAGGGGGATGATTCGAAACCCTCAAGTGACGGGGAGAACGTCAGTGACAAAGCAATTGGAATTGGTGATGATGTTAACAGGGAAAGTGAGAATGGTTCATTAATCACCACGCCAACTCAAGTAAAAATGTCGAAGAAGGGTTCCTTGAAGAAGTTCCCAACCAAGCTGAAGGACCTTCTAGCCACAGGGATTATTGAAGGACTACCAGTCAAGTATGTCCGGGGAGTGAAGGCACGAAGGCCAGGAGAGGCAGGGCTtcggggagagattagaggttCTGGGATTGTGTGCTATTGCGAAACTTGTAACGGGGTTGAGGTTGTCACCCCCACCGTGTTTGAGCTGCATGCTGGTAGTGCAAACAAACGCCCCCCAGAGTATATATACCTTGAGAATGGGAATACACTCCGTGATGTCATGAATACTTGCTCAAATGTTTCATTGGAAGTTTTGGAGGAAGCAGTACAGAAAGTCCTCGGAGGTTTCATCATGAAGAAATCTGCCATCTGTTTGAAGTGCAGAGTGTCTATATCTAAAGCTGGTAAGGGATTGTCAAGACTACTTTGCGATACATGCATGGAGTTGAAAGAGTCTCATCCTACTCCTATTCAAAAAACCGAGACTAGCAACAGGTGTGCTTCACCTGAAGATACTCCCAGaTATTTCAGCTGCCCGAAGTCACCAGAACCAGCTGTGATTCCAAAATCACTAAACAGCGGGATGAAGCACAGTACCTCTCGTGGTAAGAGTCAGGGAAGAATAACTAAGAAggATCTACGTTTGCATAAGTTGGTTTTTGAGGAAGATGTGTTACCTGATGGAACTGAAGTAGCCTACTATGCTCGCGGACAGAAGCTGTTGGCGGGTTACAAAAAGGGATATGGAATCGTTTGTAGCTGCTGTGACTCTGAGGTTAGCCCCTCACAGTTTGAAGCACATGCTGGTTGGGCATCTCGCCGCAAGCCTTATCTTCATATATACACATCCAATGGAGTCTCTCTCCATGAATTATCCATTTCGTTATCAAAAGGTCGAAGGTTTTCAACCAATGAAAACGATGATCTCTGCAGCATATGTTCAGATGGAGGGGATCTTTTGTGTTGTGATGGATGCCCAAGAGCTTTTCACATAGACTGTGTTCCTCTACCATGTGTTCCAACTGGCATTTGGTATTGTAAATATTGCCAAAACCTGTTCCAGAAAGACAAATATGTGGAGCATAATTTGAATGCTCTGGCAGCTGGAAGGATTGCAGGCATTGATCCTTTAGAGCAGATAAACCAGAGATGCATTCGCGTTGTTAAGAGTGTAGAGGTCGACCAAGGTGGATGTGCATTGTGCAGAGGTCATGGTTTCAGCAAAAGCTTTGGTCCTCGTACAGTGATTATTTGTGATCAGTGTGAAAGGGAATATCATGTGGGCTGTTTGAAGGATCATAATATGCAGAATTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGCACAGATTGCAGTCAAATTCATTCTGCTCTGCTTAATTTGGTCTCTTCTGGAGAAGAAAACCTTCCAGATTCACTTTTAAGTATGATACAAAAGAAGCATGAAGAAAAGGGTCTGGAAATTGGGACGGGTCTTGATATAAAATGGAGGATTTTAAATTGGAAATTGGCTTCTTCTGATGAAACTAGGCAACTGCTTTCAAAAGCTGTTGCAATCTTTCATGAGCGGTTTGATCCGATAGTTGATTCTACTTCAGGCCGTGATTTCATTCCAACAATGCTTTATGGAAGGAACATCAAGGGTCAAGATTTTGGTGGAATGTACTGTGCAGTGCTAACAGTGAATCAAGTGGTCGTTTCTGCAGGGGTGTTTCGTATATTTGGGGCAGAAGTGGCCGAGCTTCCCTTGGTCGCAACAATTACAGATTGCCAAGGACAGGGTTACTTCCAGTCATTGTTTTCTTGCATTGAAAGGCTGCTTGGAACCTTGAACGTGAAACAGTTTGTTCTACCAGCAGCTGAAGAAGCCGAATCAATATGGACCAGCAAATTTGGTTTTAGTAAGTTAGACCAAGAAGAGATAAACAACTACAAGAAATATTATCACATGATGATATTTCAGGGGACCTCAGTGCTCAGGAAGGCAGTTCCTGCACCCTGA 2901 0.4492 MANGKDSDEFVVLSRVRTGLKREFAFAMKAQSEICGSLGRTRASKNRNGVQDSPSTKRSKKSGSSGAKNDEQNGPKPVSKDVVEPINFEEVKGKEVKAVDDMDDVMSEEEAKSDVVDLSGDDEPKNLVGESMANREPMDEAAVPICEEEPKSDVVENVSDDEPKSSPMLESSKEGSMNDMGQAICQVADKENQSNEENLQKPLTSNILMSGETCSSKAKGIDETTPASVNGDFKAKALMEKPPRRFTRSVLKQKGDDSKPSSDGENVSDKAIGIGDDVNRESENGSLITTPTQVKMSKKGSLKKFPTKLKDLLATGIIEGLPVKYVRGVKARRPGEAGLRGEIRGSGIVCYCETCNGVEVVTPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSNVSLEVLEEAVQKVLGGFIMKKSAICLKCRVSISKAGKGLSRLLCDTCMELKESHPTPIQKTETSNRCASPEDTPRYFSCPKSPEPAVIPKSLNSGMKHSTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLAGYKKGYGIVCSCCDSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSKGRRFSTNENDDLCSICSDGGDLLCCDGCPRAFHIDCVPLPCVPTGIWYCKYCQNLFQKDKYVEHNLNALAAGRIAGIDPLEQINQRCIRVVKSVEVDQGGCALCRGHGFSKSFGPRTVIICDQCEREYHVGCLKDHNMQNLEELPEGNWFCCTDCSQIHSALLNLVSSGEENLPDSLLSMIQKKHEEKGLEIGTGLDIKWRILNWKLASSDETRQLLSKAVAIFHERFDPIVDSTSGRDFIPTMLYGRNIKGQDFGGMYCAVLTVNQVVVSAGVFRIFGAEVAELPLVATITDCQGQGYFQSLFSCIERLLGTLNVKQFVLPAAEEAESIWTSKFGFSKLDQEEINNYKKYYHMMIFQGTSVLRKAVPAP 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0359 966 MobiDBLite consensus disorder prediction 239 286 - -
Sto12g0359 966 MobiDBLite consensus disorder prediction 141 160 - -
Sto12g0359 966 MobiDBLite consensus disorder prediction 83 101 - -
Sto12g0359 966 SUPERFAMILY FYVE/PHD zinc finger 689 749 IPR011011 -
Sto12g0359 966 Gene3D - 793 961 - -
Sto12g0359 966 ProSitePatterns Zinc finger PHD-type signature. 609 648 IPR019786 -
Sto12g0359 966 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 852 951 IPR016181 -
Sto12g0359 966 Pfam Tify domain binding domain 542 590 IPR032308 -
Sto12g0359 966 Pfam Tify domain binding domain 341 396 IPR032308 -
Sto12g0359 966 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 691 754 IPR013083 -
Sto12g0359 966 SMART PHD_3 696 752 IPR001965 -
Sto12g0359 966 SMART PHD_3 608 649 IPR001965 -
Sto12g0359 966 MobiDBLite consensus disorder prediction 109 124 - -
Sto12g0359 966 CDD PHD1_AIRE 608 648 - -
Sto12g0359 966 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 671 IPR013083 -
Sto12g0359 966 MobiDBLite consensus disorder prediction 37 72 - -
Sto12g0359 966 ProSiteProfiles Zinc finger PHD-type profile. 606 651 IPR019787 -
Sto12g0359 966 MobiDBLite consensus disorder prediction 35 178 - -
Sto12g0359 966 MobiDBLite consensus disorder prediction 486 506 - -
Sto12g0359 966 MobiDBLite consensus disorder prediction 239 264 - -
Sto12g0359 966 PANTHER AUTOIMMUNE REGULATOR 1 961 - -
Sto12g0359 966 PANTHER AUTOIMMUNE REGULATOR 1 961 - -
Sto12g0359 966 SUPERFAMILY FYVE/PHD zinc finger 596 651 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0359 Sto-Chr12 2231794 2237868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0359 302 963 PHD Transcription Factor Family AT2G36720 45.568 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0359 - - jre:109008790 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0359 12 2231794 2237868 Sto12g0359 12 2231794 2237868 ECH