Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0340 ATGGCTGCGGAACAAAAAGAGTCACCTTCCAACAACCCCGGTCTTCAGGCGACCCCAGATGAAGCTACTAAAGGATACTTTATGCAGCAAACTATGTTTAGAATTAAGGACCCAAAAGCGAGCCTTGATTTTTATTCTCGCGTATTGGGCATGTCGTTGCTTAAGAGGTTGGATTTTCCAGAAATGAAGTTTAGCCTGTACTTTTTGGGCTATGAGGATCAGGCAGCAGCTCCAAGTAATGCAGTTGATAGAACCGTATGGACTTTTGCTCAGAAGGCTACAATTGAACTGACGCACAATTGGGGTACTGAAAGCGATCCAGAGTTCAAAGGGTACCACAATGGAAATTCAGAACCTCGTGGCTTTGGACACATTGGCATCACTGTTGATGACACCTACAAGGCATGTGAAAGATTTGAGCGTCTGGGGGTAGAGTTTGTTAAGAAACCAGATGATGGGAAAATGAAAGGAATAGCATTTATAAAGGATCCGGATGGATACTGGATTGAAATCTTTGATCTCAAAACAATTGGAAATATTACTGCTGATGCTGCTTAA 558 0.4265 MAAEQKESPSNNPGLQATPDEATKGYFMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDQAAAPSNAVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGNITADAA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0340 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462|GO:0046872
Sto12g0340 185 Gene3D - 2 180 IPR029068 -
Sto12g0340 185 MobiDBLite consensus disorder prediction 1 21 - -
Sto12g0340 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 30 171 IPR004360 -
Sto12g0340 185 PANTHER LACTOYLGLUTATHIONE LYASE 2 181 - -
Sto12g0340 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Sto12g0340 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462|GO:0046872
Sto12g0340 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 18 173 IPR029068 -
Sto12g0340 185 MobiDBLite consensus disorder prediction 1 18 - -
Sto12g0340 185 CDD GlxI_Zn 28 172 - -
Sto12g0340 185 TIGRFAM glyox_I: lactoylglutathione lyase 16 179 IPR004361 GO:0004462|GO:0046872
Sto12g0340 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0340 Sto-Chr12 2121821 2123904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0340 1 185 Calmodulin-binding Proteins AT1G08110 83.243 9.33e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0340 K01759 - mnt:21403510 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0340 12 2121821 2123904 Sto12g0340 12 2121821 2123904 ECH