Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0335 ATGGCGCCTAAGCACAGAAACGACAAGAAGAAAAAAGGTGGGATGGTGAAGCTGAAGATGAAGATAGTAGTAGAGAAGCTGCTATTACTGGGGGGAAGGAAATCATCGTCTAATAATTATGATGATGAAGTGCCTGAAGATGTGAAAGAAGGGCATTTTGCAGTGATTGCAGAGGATGGAGGGATGAGTCCAAAGAGATTTGTGGTGCCTCTAAGATGCTTGACCCACCCTACGTTCTTGAAGCTGTTGGAAGAAGCAGCGGAAGAGTATGGGTTTGAGCAAGAGGTGGTGGTGGAGCAGGTTCTGTATGGAGATGGTGATAGATGGATGGCCGGTCCGGACCAGCGTTCCAGTCCACTCCGGGAATCAATGTTTTGGGAGTACATTACCGCAAACGTAGTAGACAGAAACAATGGGCGGATTGTGGCAACAGCATCAACGGCAGAACGTTCCATTAAGGAATCACTTGAGTGCGGCCGCTCCTGCAATGCAAAGGCAGCAGCTGTTGTTGGAGAGGTATTGGCCATGCGGCTCAAGGTTGAGGGGCTTAACGAAGGACAGGGAAGAGGCATCCATGTGAATGTAAACAAGGAAGTACGGAAGAAAGGCTTCAAGAGCCAGACCAAGATGAAGGTTCTGGTATCTTTGATTCAATCCCCAAGGCAGACAAAAATGGTGAGGGTTGTGAGATTTGAAGTCCTTGTTGTCCTTCTTGGGTTGGGGAGAAATGACGTCTACCTTCTTCTTGGTCTTCTCGGCCAACTTGTGTCCAAGCTTGGAGGGGTCTACAGTTCCGGTGATGGTCAACTTGCCGGCATCGCCATCTGCCTTAACGGTCTCCACGCCTTCAACAACAATGTGGAATTTCAAGGCTTCAGTTGA 882 0.4875 MAPKHRNDKKKKGGMVKLKMKIVVEKLLLLGGRKSSSNNYDDEVPEDVKEGHFAVIAEDGGMSPKRFVVPLRCLTHPTFLKLLEEAAEEYGFEQEVVVEQVLYGDGDRWMAGPDQRSSPLRESMFWEYITANVVDRNNGRIVATASTAERSIKESLECGRSCNAKAAAVVGEVLAMRLKVEGLNEGQGRGIHVNVNKEVRKKGFKSQTKMKVLVSLIQSPRQTKMVRVVRFEVLVVLLGLGRNDVYLLLGLLGQLVSKLGGVYSSGDGQLAGIAICLNGLHAFNNNVEFQGFS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0335 293 CDD Ribosomal_L18_L5e 128 185 - -
Sto12g0335 293 Pfam Auxin responsive protein 35 96 IPR003676 GO:0009733
Sto12g0335 293 SUPERFAMILY Translational machinery components 128 185 - -
Sto12g0335 293 PANTHER OS09G0549700 PROTEIN 127 211 - -
Sto12g0335 293 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 127 211 IPR005484 GO:0003735|GO:0005840|GO:0006412
Sto12g0335 293 Gene3D - 123 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0335 Sto-Chr12 2094441 2104270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0335 36 92 Calmodulin-binding Proteins AT4G34750 50.877 1.55e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0335 - - minc:123192598 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0335 12 2094441 2104270 Sto12g0335 12 2094441 2104270 ECH