Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0324 ATGTGCAAGACCAAAATGGCCGTCAATGCCTCCGATCCTACCTCCAGCCCTCGAAACTCTCGCACTCCCAGACCAAGATCTTCGTCTTCCAGACCCACTTTCCCTACcgcctcttcctcctcctccgaCCCCTCCACTTCTTACACCTCCTCCGCCGCCTACTCCGGCTCCACCGGTTACAGACTCTCCTCCGATACCTCCATCTCTAGCCGAACCTCCCTCACTACCCTTCGAGATACCCTCCCTGAAAACCCTCACATCTACCATTTCTCTGAGATTTGTTCCGCCACCAACAATTTCCTCGCCAAGCGATATTCCTCGTCTTCCTCCACCCCTTCTTGGCGATGCTCTCTCAGCGGCAGAGACGTCATTGTTTTCCAGCGCAAATTCCGACGCAAACTCGAGACGGCTCAGCTCAGAGAACGCCTCTCTGTCATTTGCCGCAGCCACCACGTCAGCATCATCAAGCTCCTCGGCGTTTCCATCTCCGGCGATTACATCTACCTCGTGTATGAATTCGTGAATGGAGCCAACCTCTCCGATTGTTTGCGAAATAAGAAGAACCCGCAGTTCACGGTTCTGTCCAATTGGATCTCCAGAATGCAGGTTGCGACAGATCTCGCTCATGGACTCGATTACATTCATAACAAGACGGGTTTCACCATAAATTTCGTGCACAATCACATCAAGAGCAGCGGAATAATCGTGACGGAACCTTCGTTCAACGCCAAGATTTGCCACTTCGGCGCCGCCCAGCTCTGTGGCGAGATCGACGAAGAGAATGAAAGAGCGAAAGAGGTGAGAATTGGAGAGATCGTGGAAGAGCCATCTTCGCCCCTTAGATCGACGGGATTCGAAGGCGTGAGAGGGTACATGTCTCCGGAATACCAATCCACCGGCGTGGCGACTCAGAAGTCCGATGTGTACGCTTTCGGGGTGGTGATGCTGGAGCTGCTGTCCGGTGAGGAGCCAttgaaattcaaattcaatAGCAAGACCGGTGAATTCGTCACGAATTCGGTGATCGATACGGCGGCTGCGGTGATCGGAAGCGGCTCCGACGGCGTAGAAGGGAGGCTGAGGAAGTGGTTGGATAGGAAGCTGAAGGACTCGTTCCCGGTTGATGTGGCAGAGGAGGTGACACGTGTAGCGTTGGAGTGCGTACACGTGGATCCAGATAAGAGGCCCAACATGGGACGTGTTGCTGGAAAGATCTCGAGGCTCTATCTCAAGTCAAAGATTTGGTGCGACAATATGAGAATGCCCACTGATATTTCAGTGTCATTGGCTCCTCGATGA 1299 0.5189 MCKTKMAVNASDPTSSPRNSRTPRPRSSSSRPTFPTASSSSSDPSTSYTSSAAYSGSTGYRLSSDTSISSRTSLTTLRDTLPENPHIYHFSEICSATNNFLAKRYSSSSSTPSWRCSLSGRDVIVFQRKFRRKLETAQLRERLSVICRSHHVSIIKLLGVSISGDYIYLVYEFVNGANLSDCLRNKKNPQFTVLSNWISRMQVATDLAHGLDYIHNKTGFTINFVHNHIKSSGIIVTEPSFNAKICHFGAAQLCGEIDEENERAKEVRIGEIVEEPSSPLRSTGFEGVRGYMSPEYQSTGVATQKSDVYAFGVVMLELLSGEEPLKFKFNSKTGEFVTNSVIDTAAAVIGSGSDGVEGRLRKWLDRKLKDSFPVDVAEEVTRVALECVHVDPDKRPNMGRVAGKISRLYLKSKIWCDNMRMPTDISVSLAPR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0324 432 ProSiteProfiles Protein kinase domain profile. 90 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0324 432 SUPERFAMILY Protein kinase-like (PK-like) 121 401 IPR011009 -
Sto12g0324 432 Gene3D Transferase(Phosphotransferase) domain 1 175 421 - -
Sto12g0324 432 Gene3D Phosphorylase Kinase; domain 1 62 173 - -
Sto12g0324 432 PANTHER OS09G0572100 PROTEIN 1 432 - -
Sto12g0324 432 MobiDBLite consensus disorder prediction 1 65 - -
Sto12g0324 432 MobiDBLite consensus disorder prediction 8 65 - -
Sto12g0324 432 Pfam Protein kinase domain 132 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0324 432 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0324 Sto-Chr12 2009690 2011018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0324 83 415 Receptor kinase-like Gene Family AT1G51940 31.437 1.02e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto12g0324 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0324 - - gmx:100792694 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0324 12 2009690 2011018 Sto12g0324 12 2009690 2011018 ECH
Sto12g0324 12 2009690 2011018 Sto7g0917 7 7165030 7178517 ECH