Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0323 ATGGGCATTGGGCAAGCTGAAGCTGAAGCTGCCCCTCAGTTAGCAACAGAGAAATTGGGACTGAACGGTGCGTGTGGTATTAGGTACAAGAGCGgCTTGCAAGGAGAGCGAGGTGTTGGCTCGGGTTCCGATGTGCCAGGGTTCAATCCGGATCTCGTTCAAGTCAGGAGTGTTAGAAATGCCAATATGCTCTTGGAACAGCCTTTTTATTCATCGGAGATGCTCAATTTTTCAACGTCTTCcaatcctaatttttttgaaCCAAGCAGCAGCACTAGTAGTAGGGTGATGATGAGCCCTCAGCTGCCTTTAGTATTTCCCCATTCATTAGACATTCATTCTTCCCCAGAGTTACGCAACAGCGGATGTGATTGGATGTTAAATAATGATGCATCCACTCATTCTGCTTCTGCCGAAACCAATCCTAATTCCATTTTTATCCCCGATGAACTCGCGGGTTTACAATCTGGCCCTGGGGAAATGCATCACAACAGTTTGCAGGATATAATGACTTCACCGATGCAGCAAGGCCATGGCATTTGGGTGGAAAATCAACTTGTATTTCTTCCAAACAATGTAAACCAGTTGCCTCAGAATTCCCTTCGATGTAAAAAGACTAGTGATCAATTCCTGGTAATGAGAAGATACAAGCAACATCATCAGCAAATGCAAATGGTTGTTTCATCGTTCGAGTCCGTTGCGGGACTGAGTTCTGCTACTCCTTACGTATCCAAGGCTCTCAAGTCTGTATCAAGGCACTTCAAATGCCTGGAAAGTGCTATCTCAGATCAGCTGAAGCGTATACGACAAGTATTGGCAGAGGAATTGTCGGGAGGTAGTAGTAAAATGGAGAGCAATATGGGAAGAGTAAGGTTGATGGAGCAAAGCTTTGAAAGGAACAAATTCATTAtgggtagtagtagtagtactgCTACTGCGGCGGGCTTTAATTTTGAACAGCAACAGCAACAGCAGGCGTGGAGGCCCCAGCAGAAAGGCTTACCAGAGCGCGCCGTGGCAATTCTTAGAGCTTGGTACCCCACGGACGCTGATAAACACATGCTGGCTGCTCGAACGGGTCTATCACGAAACCAGCGTATTTACAACAACACTATTCAAGTGCAATGTTCGGAAATTGGATCCGTGGAGACCAATGTGGAAGAGGTAGAGGCACAACATTGGAATCAGGAAAAGCGATCTAAAGTGGAATATTGTGAGGTTGCGTCAAgcatggaggaggaggaggagacaGCAACAGGTTTTGTGCCGTACAGAAGGAGTGAGGTTGGGGGAGTTGGATCTGTGTCACTAACCTTGGGTCTGAGGCATGGCGTTGAATTAGGGGCACAATCGCACCACCACCAGCTTAGACGCCACTTTGCAGGCCAAATCATCAATCACTTTAATTTGCTGCCTAATTAA 1422 0.4451 MGIGQAEAEAAPQLATEKLGLNGACGIRYKSGLQGERGVGSGSDVPGFNPDLVQVRSVRNANMLLEQPFYSSEMLNFSTSSNPNFFEPSSSTSSRVMMSPQLPLVFPHSLDIHSSPELRNSGCDWMLNNDASTHSASAETNPNSIFIPDELAGLQSGPGEMHHNSLQDIMTSPMQQGHGIWVENQLVFLPNNVNQLPQNSLRCKKTSDQFLVMRRYKQHHQQMQMVVSSFESVAGLSSATPYVSKALKSVSRHFKCLESAISDQLKRIRQVLAEELSGGSSKMESNMGRVRLMEQSFERNKFIMGSSSSTATAAGFNFEQQQQQQAWRPQQKGLPERAVAILRAWYPTDADKHMLAARTGLSRNQRIYNNTIQVQCSEIGSVETNVEEVEAQHWNQEKRSKVEYCEVASSMEEEEETATGFVPYRRSEVGGVGSVSLTLGLRHGVELGAQSHHHQLRRHFAGQIINHFNLLPN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0323 473 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 212 445 - -
Sto12g0323 473 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 212 445 - -
Sto12g0323 473 Pfam Associated with HOX 212 262 IPR006563 -
Sto12g0323 473 Gene3D - 322 412 - -
Sto12g0323 473 SMART prehox3 135 263 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0323 Sto-Chr12 1998585 2004156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0323 212 365 Homeobox Transcription Factor Family AT4G36870 44.848 6.89e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0323 - - lja:Lj0g3v0269339.1 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0323 12 1998585 2004156 Sto12g0323 12 1998585 2004156 ECH