Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0314 ATGAAGCCTCAACTTGAAGTTGTTCTCTCCTTTGTTATTTGCTTGCTCTTGATTCGACACTCACTTTGTGATGTTTATTCCAAGGGAACCAGAACTCTGTTGCTAATTGTTCTACGTCATGTGACTGCCATTCAGATGCTGAAGAGAGTGGATCCATATGGACTTGTGTATGTGACCCCGATGGGTTTCCTAAAGTGGCAACAGATGGCCTTAGTCCTAATTGCTTTACAGCCTGCAACTGCACCTGGGGAACTCTCAGCACCTCACAAGCCGATGTTCTCATCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTCATAGGACTTCTTCAGTACCAGAAACAAAAGTTATCATTAATTCTCCCATTAATCATATTACAGGATGCTTTCAAAAGGCCTCTTTCTTGTTTGGGAGCAGAACAGAAACTTTCCGTGGAAAAattattcaattttcatttgcCGAACTGGAAAATGGTACTGAAAACTTCTCAGCCTCCAACCTTATTGGACTAGGTGGAAGTAGCTATGTATATCGTGGTCGGCTGAAAGATGGTAGTAATGTGGCAATTAAGCGACTAAAATCCCAAGGAGGGCCTGAAGCTGACTCTGTATTTTTTACTGAGATTGAACTATTATcaagacttcatcatcgtcatctAGTGCCTTTGCTTGGATACTGCTCCGAACTAAAAGGGAAACATGTTGAGAGGCTACTAGTATTTGAGTATATGACTAATGGCAATTTGAGAGATTGTTTGGATGGAGTTTCTGGAGAAAATATGGATTGGGCTACTCGTGTTACAATTGCCATAGGAGCTGCAAGAGGCTTGGAATATCTCCACGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGACCTTGGTATGGCTAAAAACTTCAGAGTTGATGACCCCACCAGCTGTTCCAATTCTCCAGAAAGAATGCAGGGGACGTTTGGCTATTTTGCACCTGAGTATGCAGTTTTTGGAAGAGCTTCTCCTAAGTCGGATGTCTTCAGTTTCGGGGTGGTTATTCTTGAGCTTATGAGTGGTCGAAAACCCATTCATGAATCCACAGGCATAGACCAAAGCCTTGTCATATGGGCAACACCTCGCTTACAAGATAGTAGGCGAATAATAACGGAGTTGACTGATCCACAATTGAAGGGTAACTTCCCTGAAGAAGAAGTGCAGATAATGGCATATTTAGCAAAGGAGTGTCTGCTGTTGGATCCTGATACAAGGCCAACCATGAGTGAAGTTGTTCAAATTCTCTCAGCTATATCCCCAGACAAGACTAGGAGAAGAAGACACATTCCAATGAGCCTTTTTCAGGAATCTCAGGAAGCAGAAAAACAAAGTCAATCTCTATCTGGTAAATGTTCAGATGAAAGTTCATTGCCATTAGATACTAACCAGGTTGAGgacaagaatgaaaaagaagataCAGTTTCAAAAGAGTATATGGAGAGTTTGATTCTCTTGACTTCAAAAAGAGAGGATTGGCATGCATCGGATGACGAAACAGTAGACCTAACTGAACCTCGGTTCGAATCATTTTGTCTGACAAACAGCAATTCGCGCTGA 1647 0.4032 MKPQLEVVLSFVICLLLIRHSLCDVYSKGTRTLLLIVLRHVTAIQMLKRVDPYGLVYVTPMGFLKWQQMALVLIALQPATAPGELSAPHKPMFSSDKETSCNSTTNLISHRTSSVPETKVIINSPINHITGCFQKASFLFGSRTETFRGKIIQFSFAELENGTENFSASNLIGLGGSSYVYRGRLKDGSNVAIKRLKSQGGPEADSVFFTEIELLSRLHHRHLVPLLGYCSELKGKHVERLLVFEYMTNGNLRDCLDGVSGENMDWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNFRVDDPTSCSNSPERMQGTFGYFAPEYAVFGRASPKSDVFSFGVVILELMSGRKPIHESTGIDQSLVIWATPRLQDSRRIITELTDPQLKGNFPEEEVQIMAYLAKECLLLDPDTRPTMSEVVQILSAISPDKTRRRRHIPMSLFQESQEAEKQSQSLSGKCSDESSLPLDTNQVEDKNEKEDTVSKEYMESLILLTSKREDWHASDDETVDLTEPRFESFCLTNSNSR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0314 548 Pfam Protein kinase domain 168 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0314 548 MobiDBLite consensus disorder prediction 465 506 - -
Sto12g0314 548 MobiDBLite consensus disorder prediction 466 492 - -
Sto12g0314 548 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Sto12g0314 548 CDD STKc_IRAK 172 445 - -
Sto12g0314 548 ProSiteProfiles Protein kinase domain profile. 166 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0314 548 SUPERFAMILY Protein kinase-like (PK-like) 147 445 IPR011009 -
Sto12g0314 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Sto12g0314 548 Gene3D Transferase(Phosphotransferase) domain 1 247 470 - -
Sto12g0314 548 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 89 542 - -
Sto12g0314 548 Gene3D Phosphorylase Kinase; domain 1 141 246 - -
Sto12g0314 548 SMART serkin_6 166 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0314 548 PANTHER OS01G0253100 PROTEIN 89 542 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0314 Sto-Chr12 1925753 1929612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0314 91 544 Receptor kinase-like Gene Family AT2G28250 56.332 5.80e-169 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Sto12g0314 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0314 - - gmx:100817870 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0922 7 7242162 7249119 Sto12g0314 12 1925753 1929612 CCT
Sto12g0314 12 1925753 1929612 Sto12g0314 12 1925753 1929612 ECH