Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0312 ATGGGCTTTGGTAATTCAAGATCTGTAAGATTTCAAGATGATCTTGAACAACCAAAAGTCCCTGCAACCAACAGTGATAATGGGATGAAGCTTAAATACAACATTGGTGGAGTACAAATACCCGAGCCTAGCACCAAAATGACTCAAAAGAAGGAGACAAGGAAGAAGACTGGGAAGTTCTTGAAAGCTAGAGTATTGTCTAGAGTGTTCTCAGAGGACTATGAGAGAGTGAATAGAAGAATACTAGATCCTCGAGGACAAACCATACACCGCTGGAACAAGATTTTCTTGGTAGTATGTTTGATATCTTTGTTCCTGGACCCTCTCTTCTTTTACTTGCCAGTAGTTCGAGATGAAGTGTGCATTGATATTGGAATAACACTTGAAGTTATCCTCACAAGCATCAGAACTATTGCAGATATCTTTTACATTGCTCAAATTTTCATGAGGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATAGACTCTTCTAAGATTGCAATTAGGTACCTCTGCAAGGGTTTCTTGTTAGACTTCATTGCTGCCCTGCCTCTTCCTCAAGTGTTAATTTGGATTGTCATTCCCAACCTTAGGGGTTCTACCATGACAAACACCAGAAATGTCCTTCGGTTTACTATCATTGTTCAGTATCTCCCAAGGCTATTTCTGATTTTTCCACTTTCCTCACAAATTGTAAAGGCTACTGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACCTCATGCTTTACATTTTGGCAAGCCATGTTTTAGGAGCTTCATGGTACCTTTTATCAATTGAACGACAAGAAGCGTGCTGGAGAAGTGCATGCGATCTGGAAAAATCAGCTTGTCAATATGGATTCTTTGATTGCCACAGGGTTAATGAAGACAGCAGAGTGTCCTGGTTCACAACAAGTAATATCACAAATTTATGCTCACCAGATGTCGACTTTTATCCCTTTGGCATGTATGGTGATGCTGTGTCAACTCAAGTCACAAGCTCTCCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCCTAAGGAATCTGAGTTCTGTGGGACAAAATCTTTCCACCAGCACTTTTGTTGGAGAGAATTTATTTGCCATTATTGTTGCAACCCTTGGGTTGGTTCTTTTTGCATTGCTCATAGGTAATATGCAGACATACCTTCAATCAACAACCGTCCGCTTAGAAGAGTGGAGAGTCAGAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAACTAAGACAGTCTGTGAGGAAATATGAGCAATATAAATGGTTGGCTACTCGAGGAGTAGATGAAGAGTGTCTTCTAAAAGGACTTCCCGCCGATCTACGGAGAGACATCAAGCGCCATCTTTGCCTTGACCTCGTTCGAGGAGTCCCATTGTTTGATCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGTTGAAGCCTGCATTGTGCACAGAGGGAACGTATCTAGTTCGTGAGGGCGACCCGGTGAATGAGATGCTCTTCATAATAAGAGGCCATCTTGATTCCTACACCACCAATGGAGGCAGAACTGGGTTCTTCAACTCATGCCGGATTGGTCCAGGCGATTTCTGTGGTGAGGAGCTACTGACATGGGCTTTGGATCCTCGACCAAGTGTCATACTTCCATCTTCCACTCGAACCGTGAAAGCCATCTCAGAAGTAGAAGCCTTTGCCCTGAGAGCAGAGGACCTCAAGTTTGTAGCATCTCAGTTCAGAAGGCTACACAGTAAGCAGCTTAGACACAAGTTCAGGTTTTACTCGCACCAATGGCGAACATGGGCTGCTTGTTTCATACAATCTGCATGGAGAAGGTACAAGAAAAGGAAGGAAGTTGCAGAATTGAGAGCCAAGATAAATCATGCAGATGCTGAGCCTGAAACACCAAAATCTGGGTCATCTGGGTTAGCTGTATATGGAACAAGGTTGGGTAGGAGCAATAGTATGCATTCTGGGACAAATTCTGGAGTTGTAAGCTCTTTGCAAAAGCCTGCAGAACCAGACTTTTCTGTTGATgagtaa 2106 0.4311 MGFGNSRSVRFQDDLEQPKVPATNSDNGMKLKYNIGGVQIPEPSTKMTQKKETRKKTGKFLKARVLSRVFSEDYERVNRRILDPRGQTIHRWNKIFLVVCLISLFLDPLFFYLPVVRDEVCIDIGITLEVILTSIRTIADIFYIAQIFMRFRTAYVAPSSRVFGRGELVIDSSKIAIRYLCKGFLLDFIAALPLPQVLIWIVIPNLRGSTMTNTRNVLRFTIIVQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYILASHVLGASWYLLSIERQEACWRSACDLEKSACQYGFFDCHRVNEDSRVSWFTTSNITNLCSPDVDFYPFGMYGDAVSTQVTSSPFFNKYFYCLWWGLRNLSSVGQNLSTSTFVGENLFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPPELRQSVRKYEQYKWLATRGVDEECLLKGLPADLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQSAWRRYKKRKEVAELRAKINHADAEPETPKSGSSGLAVYGTRLGRSNSMHSGTNSGVVSSLQKPAEPDFSVDE 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0312 701 Pfam Cyclic nucleotide-binding domain 507 595 IPR000595 -
Sto12g0312 701 SUPERFAMILY cAMP-binding domain-like 414 610 IPR018490 -
Sto12g0312 701 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Sto12g0312 701 CDD CAP_ED 484 615 IPR000595 -
Sto12g0312 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 701 - -
Sto12g0312 701 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
Sto12g0312 701 Gene3D Jelly Rolls 482 602 IPR014710 -
Sto12g0312 701 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Sto12g0312 701 SMART cnmp_10 484 615 IPR000595 -
Sto12g0312 701 MobiDBLite consensus disorder prediction 651 701 - -
Sto12g0312 701 PANTHER - 3 701 - -
Sto12g0312 701 MobiDBLite consensus disorder prediction 668 689 - -
Sto12g0312 701 Gene3D - 90 408 - -
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g0312 701 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto12g0312 701 MobiDBLite consensus disorder prediction 1 26 - -
Sto12g0312 701 Gene3D Helix hairpin bin 411 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0312 Sto-Chr12 1913260 1916608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0312 58 700 Ion Channels AT2G28260 77.795 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0312 K05391 - gmx:100811847 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0312 12 1913260 1916608 Sto12g0312 12 1913260 1916608 ECH