Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0308 ATGGGAACTTCCCAAAATGATGGAACAATGGAGGGCTGGTTGTATCTCATACGTTCTAATCGCTTTGGATTGCAATTCTCCCGAAAGCGTTACTTCGTCCTCGACGGCCACCTTCTTAAGAGTTTCAAATCCGTTCCCACTTCAAACAATGAGGATCCTGTTAGAAGTGCTATTGTAGATTCTTGCATACGGGTCATGGACAATGGGAGGGAAAGCATTAACAGAAAAGTATTCTTCTTGTTCACACTTTACAACACTTCAAATCACAGTGATCAATTAAAGTTAGGGGCAAGTCGTCCTGAAGAAGCAGCGAGATGGATTCAGTCATTTCAGGAAGCATCTTTAAAGGGTGCTCCTGATATTGGCGATATTCCTATAGCTTGTTCTAAGAGGAGATGGCAGTCATTTAGGCTAAGTGGTTCTTCCAGTAGAAGTCACTCAAACTCTTTAGACTGGACTCTTTTTTCTGATACACATTCAGATCCTATGACATCTGATGTTGTTGCCCCTTCACCTTGGATAATCTTTGGTTGCCAAAATGGATTGCGACTATTTAAGGAAGCGAAAGAGAGAGATTCACAAGGGAAGAAATGGGATGATCACCCTGCAATAATGGCCGTGGGTGTAGTTGATGGAACTTCAGAGGCCATTTTCCGGACTCTTATGTCACTTGGTCCCTCGAGATCAGAatGGGATTTTTGTTTCTACCAGGGAAATGTGGTTGAGCACCTGGATGGTCATACTGACATTATTCACAAGCAGCTATACAGTGATTGGTTGCCTTGGGGAATGAAACGAAGAGATCTATTGTTGCGACGTTATTGGAGGAGAGAAGATGGTGGAACCTATGTTATCCTTTACCATTCTGTGTTTCACAAGAAGTGCCCCGCCAAGAAAGGCTATGTCCGTGCCTGCCTTAAAAGTGGAGGTTATGTTATATCACCAGTGAACAAAGGAAAGCAATCTGTCGTAAAGCATATGCTTGCTATTGATTGGAAATTCTGGAAATCTTATCTAAAATCTTCGTCAGCCCATTCCATAACAGTTCGAATGCTTGAGAGAGTCGCTGCTTTACGGGAGTTATATAGAGCTAGACTAGGAAACTGTTCTTCCTCCGATTATTCATCAGGAGAGTTGACATCAAGCATTAGGTTTCATGTGAATGAAGGGGACAGCAACTTTGATATTCAAACACAGACAGGACATGAGAAAACTCATGCTGACATACATGGAGAAGTGGATCAAGCACAATCAGAGCATGCAAGCCTTGTTGGTCTAAATGATGCCGATGATGAATTTTTTGATGTTCCAGAACCATCAGATTGTGATGAATCAGAAAATGGATGGACACCAGATTGTAGTCACAAGAAGGCCCAGGAAAGTCGTCATCCAAAGTTATCAACTGCTGCTAGTTTTGTCAGAAGATTGCATGACCTTGCAGTTCAGAAGAGGGGCTATGTGGACTTGCAAGAGACGGTCAGGGAAGAAAGTATCTCATGCTCTTATGGCGCCACTCTTCCCAAAGATCCTATATGTACAATACCTTGCAGTTGGACTGAGGCAGATCCTTCTACTTTCCTGATTCGTGGAGAAAATTATCTGGAAGACCGCCAGAAGGTTAAGGCAAAAGGAACGTTGATGCAAATGGTTGGTGCCGATTGGCTGAGATCTGATATAAGGGAAGATGATCTTGGTGGTCGTCCTGGGAGCATTGTACAGGTTCCAGGCTCTACAACGTATAGCCTTGCACTATACTACATGATGAATACCCCCATCCAAGATTCCCCTCTGCTAGAGAGTTTTGTCAACGGTGATGACGCCTATAGAAATTCTAGATTTAAACTCATACCATACATATCTAAGGGTTCATGGATAGTAAAACAGAGTGTGGGAAAGAAGGCATGCCTTGTTGGTCAAGCACTTGAAATCAATTATTTCCAGGGAAAGAACTATTTGGAGCTTGGAGTTGATATTGGATCATCAACTGTTGCAAGAGGTGTTGTGAGTCTTGTCCTGGGGTACCTCAATAATCTAGTTATTGAGATGGCATTTTTGATACAGGGAAATACACCCGAGGAGCTCCCTGAGTATCTTCTTGGAACCTGTCGTCTTAACCATCTCGATGCTTCCAAATCAGTAGGACAGAGACTTCCAGTATCCTTTCTGAAAGGGGTTTTTGGTGGGTCCAAGTTGATCGTGAGTTTGCTGGCAATTCACTACTATTTGTTTGTGTTCTTTCGTTGGTTACTTGTTGTTAATTctttttggggtttttttttcttggctTTGGCTCTCCAAGGAGTAGGAATTTTGTGGATGGATCCTACTCTTAAATTTTGTGCCCTGCTGATGCTTGTTGGACTAgTGAATGCCTCTGTTACAAAAAATGATTTTGGACGTTGTGAAAGAGTTGTAAGAAATTGGGCATACTCTTCACTTGATAAAGATATCAGAGAGGATAAACATAAACTGAGAGATTTGCTATTTTTCCTTCATGTCCCAAGAACAGGAGGGCGCACATATTTTCACTGTTTCTTGAAGAAGTTGTATCCTAGTTCTCTTGAATGCCCTCGTTCTTATGATAAGCTGCGCTTTGATCCAAGCCAACCTAAGTGCAGGCTGTTAGTTACGCATGATGATTATAGCATCACAACAAAACTTCCAAAGGAGAGAACTTCTGTGGTTACCATACTTAGGGATCCCATTAGTCGTGTCTTCAGTACTTACGAATTTTCAATAGAGGTTGCTGCTAGATTTTTGGTGCATCCAAACTTGACATCTGCTACTCGGATGGCTGGACGCATGCGCTCTAGGACTAAAGGAGTAAGCACACTTGATATCTGGCCCTGGAAGTATCTAGTTCCTTGGATGAGGGAAGACCTATTCACTAGGAGAGATCTGAGGCAAAGTAGGGGTCTGCCTATCACTGAGAGCAATGATTCCTATGACATGGAAGATCTTGCAATGCCATTACAAGAATTCATCAATCATCCTGTAGCTAAGGATATTGTACATAATGGAGCCACATTCCAGGTTGCcggtttgaccaacaattcttaTCTAGCAGAATCAGATGAAGTACGCCATTGTGTACAGAGGTATAAAATTCTTGGCAAGCATGTACTACAGGTTGCAAAGAAGAGGCTAGCTGATATGTTATATGTTGGTCTTACTGAGGAACACAGAGAATCTGCCACCATGTTTGCAAACGTGGTTGGTGCTCAGGTGATCTCACAGCTGAGAGCACCAAATACTAGCATGGGAAGTGTTGATAACGCAGAACAGAGTTCACTTTCGATTTCTGAGCCTGATAGCCATGAACATCAGAATAGCACCTTAGACAGCAGAGCAAGTGAGACGGCTTCAAGTGAAGCAACAGAATCAAATatGACTGTGGATGACCTCATGGAGGCTTATGAAGTCTGTATTTCTAGTTTACGGAAGGCCCAGGCTCAACGACGGACCGCTTCTATGAAGAGAATTTCTCCAGTGAACTTTTCAAACGAGTGCTTGAATTTCAAGCTACATACTGAGTTGGGATTCCCTGAGGCGGACAGCTTGCTTCTGACCTGTTCGCTTGTAGATTTAAATATGTCCCTTTTCAATAATTGTATGATTTTCCAGGCTCGCGTTCAAGTTTCTGAAGCGGTTCTCCAGcaaataaaatttcttaatgACCTCGACTTAGAGCTCTATGAATATGCAAGAGAACTTTTTTCCAAGCAACATAAAAATACGTTCCTGAAATTTACTGAGGAGAAATGGGAAAACATGTCAAGCATTGCCAACTGGAAGGATATCAATAACATGAAGGATTCTTGGTTTTTCGACAAGAATTTTAATGGTCTATCAGATGAAATCTTTGATGATGTCAAATTTTTTGATTTTCCATTGGAAGATATAGAACCTGATGCCGTGGAAGAAGATTGGGATGCTCAGTTCAAACACCTTGAAGAGCCATCATTTGATGTTTTCTCGGTACCTTCTTCTGGGTTGTGTGATAAAACTCAAAAAGGCCATCCAAAACTTGGGAGGATCTCTACTCCTTGTGATGAGATATCCCCATTAGAACAACTGCCAGAGACCGCTGGGCCTAAGTATATCAAAAGCACTCCCAACCAGAATGTCTCTTCCAACGGAAAAGATTTGAGCCAATTTCGAACCTACAGTCCAGTTTCTGTTTTCGAAAGCAGTAGTTCTTCATCAGGTGAGAATGCCTTTGATCAACCTGTCATCCCAAAGCGTGCTCGTGGAAAACGTCGACGTCTCTCAATTTTCAGCCCTCTATTCTCGATTCCTTTCATCGCTTCTCCTCTGGCTTTGCAAAAATCTCGAAGAGCAGCTGCTTCTGATTCAGATTTTGAAGCACACCTTACTGGGAAATCACCATTTGGAGTCAAAAGAAAGCAGAGGAAGAAGGATCTCCGTGTGCTTTCTGGTCATGTTGAGATGAAGAGATTCTCATCGCAGGAGTCCATCATTCCCAGAAAATGCATGCATTGCCAGGTGACGAAGACCCCACAATGGAGAGAGGGACCTATGGGCCCAAAGACTCTTTGCAATGCATGTGGGGTTCGATATAGATCTGGCCGGCTCTTCCCCGAATACCGGCCTGCAGCCAGTCCCACATTTGTAGCATCATTGCACTCTAACTGTCACAAGAAAGTTTTAGAGATGAGAAACGGAGCCATCCCTGCCCCTGAGGCTGATAAGGGTTCTAAAGTGCCTTTATCATCAAACCTTTCTGGAAATTCACTAGGGTAA 4764 0.4232 MGTSQNDGTMEGWLYLIRSNRFGLQFSRKRYFVLDGHLLKSFKSVPTSNNEDPVRSAIVDSCIRVMDNGRESINRKVFFLFTLYNTSNHSDQLKLGASRPEEAARWIQSFQEASLKGAPDIGDIPIACSKRRWQSFRLSGSSSRSHSNSLDWTLFSDTHSDPMTSDVVAPSPWIIFGCQNGLRLFKEAKERDSQGKKWDDHPAIMAVGVVDGTSEAIFRTLMSLGPSRSEWDFCFYQGNVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRREDGGTYVILYHSVFHKKCPAKKGYVRACLKSGGYVISPVNKGKQSVVKHMLAIDWKFWKSYLKSSSAHSITVRMLERVAALRELYRARLGNCSSSDYSSGELTSSIRFHVNEGDSNFDIQTQTGHEKTHADIHGEVDQAQSEHASLVGLNDADDEFFDVPEPSDCDESENGWTPDCSHKKAQESRHPKLSTAASFVRRLHDLAVQKRGYVDLQETVREESISCSYGATLPKDPICTIPCSWTEADPSTFLIRGENYLEDRQKVKAKGTLMQMVGADWLRSDIREDDLGGRPGSIVQVPGSTTYSLALYYMMNTPIQDSPLLESFVNGDDAYRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFQGKNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLIQGNTPEELPEYLLGTCRLNHLDASKSVGQRLPVSFLKGVFGGSKLIVSLLAIHYYLFVFFRWLLVVNSFWGFFFLALALQGVGILWMDPTLKFCALLMLVGLVNASVTKNDFGRCERVVRNWAYSSLDKDIREDKHKLRDLLFFLHVPRTGGRTYFHCFLKKLYPSSLECPRSYDKLRFDPSQPKCRLLVTHDDYSITTKLPKERTSVVTILRDPISRVFSTYEFSIEVAARFLVHPNLTSATRMAGRMRSRTKGVSTLDIWPWKYLVPWMREDLFTRRDLRQSRGLPITESNDSYDMEDLAMPLQEFINHPVAKDIVHNGATFQVAGLTNNSYLAESDEVRHCVQRYKILGKHVLQVAKKRLADMLYVGLTEEHRESATMFANVVGAQVISQLRAPNTSMGSVDNAEQSSLSISEPDSHEHQNSTLDSRASETASSEATESNMTVDDLMEAYEVCISSLRKAQAQRRTASMKRISPVNFSNECLNFKLHTELGFPEADSLLLTCSLVDLNMSLFNNCMIFQARVQVSEAVLQQIKFLNDLDLELYEYARELFSKQHKNTFLKFTEEKWENMSSIANWKDINNMKDSWFFDKNFNGLSDEIFDDVKFFDFPLEDIEPDAVEEDWDAQFKHLEEPSFDVFSVPSSGLCDKTQKGHPKLGRISTPCDEISPLEQLPETAGPKYIKSTPNQNVSSNGKDLSQFRTYSPVSVFESSSSSSGENAFDQPVIPKRARGKRRRLSIFSPLFSIPFIASPLALQKSRRAAASDSDFEAHLTGKSPFGVKRKQRKKDLRVLSGHVEMKRFSSQESIIPRKCMHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVASLHSNCHKKVLEMRNGAIPAPEADKGSKVPLSSNLSGNSLG 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1085 1106 - -
Sto12g0308 1587 Gene3D - 173 368 IPR023393 -
Sto12g0308 1587 Gene3D - 823 1117 IPR027417 -
Sto12g0308 1587 ProSitePatterns GATA-type zinc finger domain. 1498 1523 IPR000679 GO:0006355|GO:0043565
Sto12g0308 1587 ProSiteProfiles START domain profile. 152 331 IPR002913 GO:0008289
Sto12g0308 1587 SMART PH_update 8 117 IPR001849 -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1367 1382 - -
Sto12g0308 1587 Pfam PH domain 10 114 IPR001849 -
Sto12g0308 1587 Pfam GATA zinc finger 1498 1531 IPR000679 GO:0006355|GO:0043565
Sto12g0308 1587 SMART START_1 162 364 IPR002913 GO:0008289
Sto12g0308 1587 CDD START 163 362 - -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 448 462 - -
Sto12g0308 1587 PANTHER PLECKSTRIN HOMOLOGY (PH) AND LIPID-BINDING START DOMAINS-CONTAINING PROTEIN 8 713 - -
Sto12g0308 1587 CDD ZnF_GATA 1497 1544 IPR000679 GO:0006355|GO:0043565
Sto12g0308 1587 Gene3D - 1494 1542 IPR013088 GO:0006355|GO:0008270
Sto12g0308 1587 CDD PH 10 110 - -
Sto12g0308 1587 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 8 713 IPR045096 -
Sto12g0308 1587 ProSiteProfiles PH domain profile. 7 115 IPR001849 -
Sto12g0308 1587 Pfam START domain 199 335 IPR002913 GO:0008289
Sto12g0308 1587 SUPERFAMILY PH domain-like 8 114 - -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1085 1129 - -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1114 1129 - -
Sto12g0308 1587 SUPERFAMILY Bet v1-like 158 336 - -
Sto12g0308 1587 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 1491 1553 - -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 439 462 - -
Sto12g0308 1587 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 518 708 IPR009769 -
Sto12g0308 1587 Gene3D - 3 118 IPR011993 -
Sto12g0308 1587 ProSiteProfiles GATA-type zinc finger domain profile. 1496 1528 IPR000679 GO:0006355|GO:0043565
Sto12g0308 1587 SMART GATA_3 1492 1542 IPR000679 GO:0006355|GO:0043565
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1564 1587 - -
Sto12g0308 1587 MobiDBLite consensus disorder prediction 1363 1382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0308 Sto-Chr12 1858697 1877288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0308 1283 1560 C2C2-Gata Transcription Factor Family AT1G08000 38.112 3.97e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto12g0308 DUF1336 1.1e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0308 - - gmx:100779206 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0308 12 1858697 1877288 Sto12g0308 12 1858697 1877288 ECH