Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0294 ATGGCGAAGGACGTAGAGGTGGTGGAGCAGGGAGAGTTCTCGGCGAAGGACTACCATGAGCCACCGCCGGCGGCGCTGATAGACGCGGAGGAGCTGACGAAGTGGTCGTTTTACAGAGCAGTGATAGCAGAGTTCATAGCGACACTTCTGTTCCTGTACATAACGGTGTTAACCATAATTGGGTACAACAGCCAGACGGACCCCAAGAAAGCAGGAACCACTGAGTGTGATGGCGTTGGCATCTTAGGCATCGCGTGGGCCTTCGGTGGGATGATCTTCATCCTGGTTTACTGCACGGCGGGGATGGCGTTGTTGTATATGGTAGCACAGTGTGGGGGTGCTATATGCGGTACTGGGCTTGCGAAGGGGTTCCAAAAGGCATACTATGATAGGTACGGTGGTGGGGCCAACTTCGTTCAGCCTGGCTACAACAAAGGTACCGCTTTGGGTGCCGAGATTATCGGTACCTTTGTTCTCGTCTACACGGTCTTCTCAGCCACTGATCCTAAGAGGAACGCCAGAGACTCCCATGTTCCTgtGTTGGCTCCTCTGCCTATTGGATTCGCGGTGTTCATGGTTCACTTGGCTACAATCCCTGTGACGGGTACGGGTATTAACCCCGCAAGAAGTTTCGGTGCTGCTGTTATCTACAACAAAGACAAAATCTGGGATGACCAGCCGTGGCTGCATTCTATCACCAATTTATTCTCAGAGCTGCAGCCATTAAAGCTCTTGGATCCTTCAGGagcaacaattaattaa 762 0.5144 MAKDVEVVEQGEFSAKDYHEPPPAALIDAEELTKWSFYRAVIAEFIATLLFLYITVLTIIGYNSQTDPKKAGTTECDGVGILGIAWAFGGMIFILVYCTAGMALLYMVAQCGGAICGTGLAKGFQKAYYDRYGGGANFVQPGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNKDKIWDDQPWLHSITNLFSELQPLKLLDPSGATIN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0294 253 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 PRINTS Major intrinsic protein family signature 151 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 SUPERFAMILY Aquaporin-like 31 221 IPR023271 -
Sto12g0294 253 PANTHER AQUAPORIN PIP2-4-RELATED 1 102 - -
Sto12g0294 253 PANTHER AQUAPORIN PIP2-4-RELATED 103 235 - -
Sto12g0294 253 Pfam Major intrinsic protein 103 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 Pfam Major intrinsic protein 31 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0294 253 Gene3D Glycerol uptake facilitator protein. 24 237 IPR023271 -
Sto12g0294 253 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 103 235 IPR034294 -
Sto12g0294 253 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 102 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0294 Sto-Chr12 1768434 1769476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0294 1 229 Major Intrinsic Protein MIP AT2G37170 71.429 2.68e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0294 K09872 - gmx:100818032 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0294 12 1768434 1769476 Sto12g0294 12 1768434 1769476 ECH