Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0268 ATGAGCGTCATCGATATTATTGTCCGAGTCGATTCTATTTGCCAGAAATACGACAGATATGACATTGACAAGCAGCGCCAGCTCAATGCCTACGGCGATGATGCCTTTGCCCGCCTCTACGCCGTCGTTGAAAATAGCATTCAAGCCGCTCTTAGTAAAGCGGAAATTGCTGCTCATGAGCAAAACAGGGCATCTGCTGCGGCATTGAATGCTGAAGTTCGTCGGACCAAGGGTCGACTCATGGACGAAGTCCCTAAGCTGCGTAAACTAGCACAGAAGAAGGTTAAGGGTCTCACAAATGAAGAAATGGCCATTCGAAGTGATCTTGTTCTGGCATTGCCAGAAAGGATACAAGCAATACCAGATGGTATTGCCGCAGCAGCTAATCAAGCCGGAGGAGGGGCTGGTCCCACATCTCATCAGAATATTAAGTTCGATTCAACAGAGGGATACAATGATGATGGATATTACCAACAAACTGAAGAATCAAATCAGTTTAGGCAAGAATTTGAAATGCGAAAAATGAAACAGgatgAAGGACTTGATATCATATCAGAAGGATTGGATACGTTGAAAAATTTGGCCCTTGACATGAATGAGGAAATGGATCGCCAAGTTCCATTAATGGATGAAATTGGTACaaagGTGGATAAGGCAACATCTGATATTAGAAATAACAACACGAGGCTGAAGAAAACTCTCCACGAgGTGAGGTCTAGTCGAAATTTTTGCATCGACATCATTCTGCTGTGTGTTCTTCTAGGCATTGTTTCCTATATATACAAGTAA 789 0.4271 MSVIDIIVRVDSICQKYDRYDIDKQRQLNAYGDDAFARLYAVVENSIQAALSKAEIAAHEQNRASAAALNAEVRRTKGRLMDEVPKLRKLAQKKVKGLTNEEMAIRSDLVLALPERIQAIPDGIAAAANQAGGGAGPTSHQNIKFDSTEGYNDDGYYQQTEESNQFRQEFEMRKMKQDEGLDIISEGLDTLKNLALDMNEEMDRQVPLMDEIGTKVDKATSDIRNNNTRLKKTLHEVRSSRNFCIDIILLCVLLGIVSYIYK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0268 262 PANTHER SYNTAXIN-72 1 261 - -
Sto12g0268 262 SUPERFAMILY SNARE fusion complex 164 232 - -
Sto12g0268 262 Gene3D - 171 232 - -
Sto12g0268 262 CDD SNARE_Qc 176 232 - -
Sto12g0268 262 PANTHER SYNTAXIN 1 261 IPR045242 -
Sto12g0268 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Sto12g0268 262 Pfam SNARE domain 208 258 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0268 Sto-Chr12 1634811 1636925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0268 1 261 SNARE and Associated Proteins AT3G09740 64.639 1.10e-127 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0268 K08506 - gmx:100777251 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0268 12 1634811 1636925 Sto12g0268 12 1634811 1636925 ECH