Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0258 ATGGGAGCTGCTCGCAAGTTGAGGTCCCACCGAAGAAGGCAGAGGTGGGCCGACAAGGCATACAAAAAGTCCCATCTGGGGAATGAATGGAAGAAACCATTTGCTGGGTCCTCTCATGCTAAAGGCATTGTTCTTGAAAAAATTGGAATTGAGGCTAAGCAGCCAAACTCTGCTATTAGAAAATGTGCTCGAGTGCAGTTGATCAAGAACGGAAAGAAGATTGCAGCCTTTGTGCCAAATGATGGTTGCTTGAACTATATTGAAGAGAATGATGAGGTGCTGATTGCTGGATTCGGTCGGAAAGGGCATGCTGTTGGAGATATTCCCGGAGTTCGATTCAAGGTTGTGAAGGTATCAGGGGTGTCTCTTCTGGCACTTTTcaaagagaagaaggagaagccaAGGTCttga 411 0.438 MGAARKLRSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0258 136 MobiDBLite consensus disorder prediction 1 19 - -
Sto12g0258 136 PANTHER 40S RIBOSOMAL PROTEIN S23 1 136 - -
Sto12g0258 136 ProSitePatterns Ribosomal protein S12 signature. 53 60 IPR006032 GO:0003735|GO:0005840|GO:0006412
Sto12g0258 136 MobiDBLite consensus disorder prediction 1 20 - -
Sto12g0258 136 Pfam Ribosomal protein S12/S23 25 135 IPR006032 GO:0003735|GO:0005840|GO:0006412
Sto12g0258 136 SUPERFAMILY Nucleic acid-binding proteins 14 134 IPR012340 -
Sto12g0258 136 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 136 IPR006032 GO:0003735|GO:0005840|GO:0006412
Sto12g0258 136 CDD Ribosomal_S23 20 133 IPR005680 GO:0003735|GO:0006412|GO:0015935
Sto12g0258 136 TIGRFAM uS12_E_A: ribosomal protein uS12 3 135 IPR005680 GO:0003735|GO:0006412|GO:0015935
Sto12g0258 136 Gene3D - 19 136 IPR012340 -
Sto12g0258 136 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 10 136 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0258 1 136 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 94.853 4.12e-91 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0258 K02973 - rcu:8263368 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0258 12 1552060 1552676 Sto12g0258 12 1552060 1552676 ECH