Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0249 ATGGTGGATCCTAATACCATCGCCGATTTTCCCGCCGTTCCGACGCACGGAGGGCAGTTCATTCGGTATAACATATTTGGAAACCACTTCGAAGTTTCAGCGAAGTACAGGCCTCCACTCATGCCTATTGGTCGCGGCGCCTATGGAATAGTCTGTTCGCTGTTGAATGCGGAGAGTAACGAGATGGTGGCTGTTAAGAAGATAGCCAACGCTTTTGACAGTCTCATGGACGCTAAGCGCACGCTTCGTGAGATTAAGCTTCTTCGGCATTTGGATCACGAAAATGTAATTGCTATAAAAGATGTAATTCCACCACCTTTGCGTAGGGAGTTTACGGATGTCTACATAGCCACGGAACTCATGGATACTGATCTTCACCACATTATCCGCTCTAATCAAAATCTTTCAGAGGATCACTGCCAATACTTCTTGTATCAGATTCTTCGTGGACTCAAGTATATACATTCTGCAAATATCATCCATAGAGATTTAAAACCAAGCAACCTGTTGCTAAATGCAAACTGTGATTTGAAGATATGTGATTTTGGGCTTGCACGAACGACTTTGGAAAATGATTTCATGACAGAATATGTTGTCACAAGATGGTATAGGGCTCCTGAATTGTTGTTGAACTCCTCAGATTACACCTCTGCGATAGACGTGTGGTCTGTAGGTTGCATCTTTATGGAGCTGATGAACAAAAAGCCTCTGCTTCCAGGCAAAGATCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCAGACCTTGGGTTAGTGAGAAATGAGGATGCAAAAAGATATATCCGACAACTTCCCCAATATCCTCGTCAACCTTTAGCTCGGGTTTTCCCCCATGTTCATCCCTTAGCTATTGATCTCATTGATAGAATGTTGACTATTGACCCCACTCGAAGAATTACAGTCGAAGAAGCATTAGCGCATCCATACCTGGCTAAACTGCATGATACAGCTGATGAGCCAGTCTGCGCAGAGCCATTCAAATTTGATTTTGAGCAAATACCCTTGGATGAAGAACAAATAAAAGATATGATCTACGAGGAGGCATTAGCACTCAATCCTCACTACGCATAA 1110 0.4369 MVDPNTIADFPAVPTHGGQFIRYNIFGNHFEVSAKYRPPLMPIGRGAYGIVCSLLNAESNEMVAVKKIANAFDSLMDAKRTLREIKLLRHLDHENVIAIKDVIPPPLRREFTDVYIATELMDTDLHHIIRSNQNLSEDHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARTTLENDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLLPGKDHVHQMRLLTELLGTPTEADLGLVRNEDAKRYIRQLPQYPRQPLARVFPHVHPLAIDLIDRMLTIDPTRRITVEEALAHPYLAKLHDTADEPVCAEPFKFDFEQIPLDEEQIKDMIYEEALALNPHYA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0249 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Sto12g0249 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 367 - -
Sto12g0249 369 ProSiteProfiles Protein kinase domain profile. 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0249 369 SUPERFAMILY Protein kinase-like (PK-like) 42 331 IPR011009 -
Sto12g0249 369 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Sto12g0249 369 Gene3D Phosphorylase Kinase; domain 1 20 360 - -
Sto12g0249 369 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sto12g0249 369 Pfam Protein kinase domain 42 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0249 369 SMART serkin_6 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0249 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 367 - -
Sto12g0249 369 Gene3D Transferase(Phosphotransferase) domain 1 121 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0249 Sto-Chr12 1502923 1505008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0249 8 369 MAP Kinase Gene Family AT3G45640 82.320 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto12g0249 Pkinase 4.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0249 K20536 - gmx:100801339 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0249 12 1502923 1505008 Sto12g0249 12 1502923 1505008 ECH