Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0231 TTGCTAAGCTTTTCTGCGACCTTCGTTCCACTAGACAATTACCTTATAGACTGTGGAGCAACTTCTAATACTTCAGTTGGAAACCGTAATTTCGCTGCGGATAGCTTATATAAGAAAATCCTTTCTACCCAACGTGATGTTCTTGCCAATACTCCTTCAAAATCAATTACTTCCTCTGCTGATTCACCTCTCTATCAAACGGCAAGAATCTTCACTGAATCCTCAAAGTACACTTTCTCAATAAACCAAAAGGGTAGACATTCAAACCTTGCTACTAATGTTTCAAGTGTTCGTGCTGTCAAGTATATTGATGGTGGTCCAACTGAAAATACTGCACCGCCTACTGTCTATGGTACTCTCACGGAGATGAACTCAAACAGTGATCCTCGTAGTAATTTCAATGTGACATGGCAGTTTGATGTGGATCCTGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGACATCGTGAGTAAAAATCTCAATGAACTCTACTTCAATGCCTACGTCAACTCCTACTTGGCTGCTAAGGATCTTGATCTTAGTATTCTAAGTAATAATGTTTTGGGTGCACCATATTATAAGGATTTGGTTACAGCCTCAACTGAAAGCAATAAAATTCGTGTAAGTGTCGGCCCTTCTCCTGTAAATTCTGATTACCCAAATGCCATATTAAATGGGCTGGAGATAATGAAAATGAAAGCAGCAGCAATTAGTACTTCTGATTCAAACTCAAATAAGAAAGTTGCACTTATAGTGGGTGTGGTTCTTGGGACAGTTTGTGCAGTGGCCTTGGCTGgatttttctttgtattttgCAGAAGAAGACGTTTGGTGCGACAAGGTCAATCAAAGACATGGATTCCCTTATCCATCAATGATGGAACTTCTCACACTATGGGAAGTAAGTATTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTCGGGTATCGCATCCCTTTTGCAGCTGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGATAGGTGGTTTTGGGAAGGTATACAAGGGAGAACTAAATGATGGCACTAAAGTGGCAGTTAAGAGGGGGAATCCTCGGTCGCAGCAAGGGTTTGCAGAGTTCCGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTGTCCTTGATAGGGTATTgtgatgaaaaaaatgaaatgatctTGATATATGAGTATATGGAGAAGGGAACACTCAAGAGTCATCTTTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAAGAGAGACTAGAGATATGCATTGGATCGGCTAGAGGACTCCATTACCTTCACACTGGCTATGCTAAAGCGGTTATTCACCGTGATGTGAAGTCAGCAAATATCCTGCTTGATGAAAACCTCATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGGCCTGAAATTGATCAGACACATGTGAGCACAGCAGTAAAAGGGAGTTTTGGGTACCTCGATCCTGAGTATTTCAGGAGGCAACAATTAACAGAAAAGTCAGATGTTTATTCATTTGGGGTAGTGCTGTACGAGGTTCTTTGTGCAAGACCGGTAATAGATCCTACCCTTCCTAGGGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCAACACTGGCTGGGAAGATCAGACCAGACTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGACCGGCCCTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTCCAACTTCAAGAGGCAGTTGTCCAAGGTGATCCTGAAGAAAACAGTACCAATATGATTGGAGAACTCTCTCCTCAGATCAACAATTTCAACCACGATGGTGTGGATGATCTGTCTGGTGTGTCAATGAGTAGGGTATTCTCACAGCTGGTGAAATCTGAGGGAAGGTGA 1986 0.4194 LLSFSATFVPLDNYLIDCGATSNTSVGNRNFAADSLYKKILSTQRDVLANTPSKSITSSADSPLYQTARIFTESSKYTFSINQKGRHSNLATNVSSVRAVKYIDGGPTENTAPPTVYGTLTEMNSNSDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKNLNELYFNAYVNSYLAAKDLDLSILSNNVLGAPYYKDLVTASTESNKIRVSVGPSPVNSDYPNAILNGLEIMKMKAAAISTSDSNSNKKVALIVGVVLGTVCAVALAGFFFVFCRRRRLVRQGQSKTWIPLSINDGTSHTMGSKYSNGTTLSAASNFGYRIPFAAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGFAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLYEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDGVDDLSGVSMSRVFSQLVKSEGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0231 661 PANTHER OS07G0166700 PROTEIN 5 86 IPR045272 GO:0004714|GO:0006468
Sto12g0231 661 PANTHER OS07G0166700 PROTEIN 88 637 IPR045272 GO:0004714|GO:0006468
Sto12g0231 661 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Sto12g0231 661 SUPERFAMILY Protein kinase-like (PK-like) 309 603 IPR011009 -
Sto12g0231 661 ProSiteProfiles Protein kinase domain profile. 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0231 661 Gene3D Transferase(Phosphotransferase) domain 1 408 625 - -
Sto12g0231 661 CDD STKc_IRAK 338 603 - -
Sto12g0231 661 Pfam Protein tyrosine and serine/threonine kinase 337 531 IPR001245 GO:0004672|GO:0006468
Sto12g0231 661 Gene3D - 89 235 - -
Sto12g0231 661 Gene3D - 13 88 - -
Sto12g0231 661 Pfam Malectin-like domain 107 233 IPR024788 -
Sto12g0231 661 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 5 86 - -
Sto12g0231 661 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 88 637 - -
Sto12g0231 661 Gene3D Phosphorylase Kinase; domain 1 294 407 - -
Sto12g0231 661 SMART serkin_6 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0231 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0231 Sto-Chr12 1373094 1375547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0231 1 87 Receptor kinase-like Gene Family AT3G46290 41.379 1.01e-13 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto12g0231 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0231 - - gmx:100806488 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0231 12 1373094 1375547 Sto12g0231 12 1373094 1375547 ECH