Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0224 ATGCCGCGAAAAGGAATGAGAAGCGTCTTCTTCAAACCCTCATCACCTTCATCTTCCTCCTCACAGCCCTCATCATCGCCTTCCTTCCGCAACTTCACTGTTTCCTTAATAGAGGACAATATCGAATCTGCTCGTACCCTCATAACCAAATGGGATACCGGCCAATCCGATTCCTATGCAAGAATCACTCCTCTTTTCAACGCCAACCGCCGTGAAGCCAAACGCTACCTCCGCGCTGTCAAGGACTTACAATCCgccatgcactacctcatcgcACAGGATTCTTCCTCTCACACTATCATCCAAGCTCAAAGCCTTATGCAACTCGCCATGAAGCGCCTCCAGCACGAGTTTTATCACATACTATCTGCCAATCGAGACCATTTGGATCCTGAAACGGTGTCGTCTCGCTCATCCTTCTCCACCTCGGATCACAGGAGCAGCGCCTCCGATTTTGACTTTGATGAGATATTATCTGCTGTCTCTGAGGATGAGTTTCGTATCGCCGGCGATTCCATCACGGAGACGGAGAAGGCGTCTATGCTTGCCATGGCGGATTTGAAATTGATTGCGGAATCCATGATTTCGTCGGGATATGGCAGAGAGTGTATCAATACTTACAAAAGTGTGAGGAAATCGATCGTGGATGAGGCTCTATTTCATCTCGGAGTAGAGCAGCTCAGTTTCTCTCGGATCCAGAAAATGGATTGGGAGGTGCTGGAGTTGAAGATCAAGAGCTGGTTGAATGCCATCAAGGTGGCAGTCGGAACTCTGTTTTACGGCGAAAGAGTACTCTGCGACCAAGTCTTCGCCACTTCAGAGAAAGTCGCAGAGTCCTGTTTCGCAGAGATTACACGAGACGGTGCGATGTTGCTGTTTGGATTCCCGGAACACGTGGCAAAGAGCAAGAAAACTCCTGAGAAAATGTTCAGGACACTGGACATGTACGAAGCAATCATAGACAATTGGCCTCAAATTGAATCCATCTTCTCCTTCGAGTCAACGTCCGCCGTCCGATCACAAGCCGTGGATTCGCTAGTCAAACTTGGAAAAGCCATCTCTACGATGCTAgccgacttcgaaacggcgaTTCAGAAAGAGTCCTCCAAGAGATTAGTCCCAGGTGGTGGGGTCCACCCGCTCACGAGCTACGTCATGAACTACATCACGCTCCTCGCTGATTACAGCCACGTGCTCGCCGATATCGTCGCCGATTGGCCGTTAACGTCACAACCGTCGTTACCGGAGTCTTACTTGCCCAGTCCTAATCACGAAGATGGCCGTTCATCGGAGATAACGGTGCGGTTCGCATGGCTCATACTCGTCCTCCTCTGCAAAATCGACACCAAAGCAGGACTCTACAAGGATGCAGCACTTTCGTACCTTTTCCTGGCCAACAACCTCCAATACGTCGTCGTCAAGGTTCGCACATCTGAGCTTAGTGGTTTTCTCGGCGAGGAGTGGCTAACGAAGCACGAATCGAAGGTTACAGAGTACGTGTCCAAGTACGAGCGCATAGGGTGGAGCAAGGTCATGTCGTTGCTGCCGGAAAATCTAACGGCGGATATGCCGCCGGAGAAAGCCAAGGTGTGGTTCAGGAACTTCAACAACGCGTTTCATGAAGCGTACAGGAAACAGACGTCGTGGATAGTATCCGACCCGAAGATGCGAGAAGAGGTCAAAGCTTCGATAGAGGCGAAGCTGGTGACGCGATACGCGGAATTTTACGAGGCGTATCGGGTCGGGTTGATGGGCAATAACGAGTCGGATTCGGCTGTGAGATTTTCGCCTGATGACTTGAGGAATTATTTGTCTGACATTTTGCACGGGTTGAGGATGGGAACTTCTGGAAGCAGCTTTTCGTCGCAATCTTCGTCGTCTTCCCGTCGCTCCATTCGTCTGTGGGCTTCAAAGTCAAATATGACGCACGCGTACAATATGTGTGACAGAGCTTGA 1956 0.4918 MPRKGMRSVFFKPSSPSSSSSQPSSSPSFRNFTVSLIEDNIESARTLITKWDTGQSDSYARITPLFNANRREAKRYLRAVKDLQSAMHYLIAQDSSSHTIIQAQSLMQLAMKRLQHEFYHILSANRDHLDPETVSSRSSFSTSDHRSSASDFDFDEILSAVSEDEFRIAGDSITETEKASMLAMADLKLIAESMISSGYGRECINTYKSVRKSIVDEALFHLGVEQLSFSRIQKMDWEVLELKIKSWLNAIKVAVGTLFYGERVLCDQVFATSEKVAESCFAEITRDGAMLLFGFPEHVAKSKKTPEKMFRTLDMYEAIIDNWPQIESIFSFESTSAVRSQAVDSLVKLGKAISTMLADFETAIQKESSKRLVPGGGVHPLTSYVMNYITLLADYSHVLADIVADWPLTSQPSLPESYLPSPNHEDGRSSEITVRFAWLILVLLCKIDTKAGLYKDAALSYLFLANNLQYVVVKVRTSELSGFLGEEWLTKHESKVTEYVSKYERIGWSKVMSLLPENLTADMPPEKAKVWFRNFNNAFHEAYRKQTSWIVSDPKMREEVKASIEAKLVTRYAEFYEAYRVGLMGNNESDSAVRFSPDDLRNYLSDILHGLRMGTSGSSFSSQSSSSSRRSIRLWASKSNMTHAYNMCDRA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0224 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 618 IPR004140 GO:0000145|GO:0006887
Sto12g0224 651 Gene3D Exocyst complex component Exo70 58 614 - -
Sto12g0224 651 MobiDBLite consensus disorder prediction 1 27 - -
Sto12g0224 651 MobiDBLite consensus disorder prediction 130 149 - -
Sto12g0224 651 SUPERFAMILY Cullin repeat-like 65 607 IPR016159 -
Sto12g0224 651 MobiDBLite consensus disorder prediction 11 27 - -
Sto12g0224 651 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 618 - -
Sto12g0224 651 Pfam Exo70 exocyst complex subunit 245 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0224 Sto-Chr12 1329583 1331689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0224 1 609 EXO70 exocyst subunit family AT3G09520 47.981 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0224 K07195 - jre:108979200 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0224 12 1329583 1331689 Sto12g0224 12 1329583 1331689 ECH