Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0212 ATGGCTCCGAAAGCTGATAGTTCGAAGAAGACTGATCCTAAGGCACAGGCCTTGAAAACTGCTAAAGCAGTCAAGTCAGGCCCTACCTTCAAGAAGAAGGCCAAGAAAATCCGCACATCCGTCACATTCCATCGGCCAAAGACTTTGAAAAAGGCCAGGAACCCCAAATATCCTCGTATTAGTGCTCCACCAAGAAATAAGCTTGAtcattatcaaattttgaaatacCCTCTCACCACTGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACCTACGCGCTGACAAGAAGAAGATAAAGGATGCCGTGAAGAAAATGTATGACATTCAAGCCAAGAAAGTAAATACCTTGATCAGGCCTGATGGCACCAAGAAAGCCTATGTCAGACTGACTCCTGATTATGATGCCTTGGACGTGGCAAACAAGATTGGGATTATCTAA 462 0.4221 MAPKADSSKKTDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKARNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0212 153 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 70 146 IPR012678 GO:0003735|GO:0005840|GO:0006412
Sto12g0212 153 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 153 - -
Sto12g0212 153 TIGRFAM uL23_arch: ribosomal protein uL23 77 153 IPR019985 GO:0003735|GO:0005840|GO:0006412
Sto12g0212 153 ProSitePatterns Ribosomal protein L23 signature. 131 146 IPR001014 -
Sto12g0212 153 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 153 IPR013025 GO:0003735|GO:0005840|GO:0006412
Sto12g0212 153 MobiDBLite consensus disorder prediction 1 16 - -
Sto12g0212 153 Gene3D - 34 153 IPR012677 -
Sto12g0212 153 MobiDBLite consensus disorder prediction 1 38 - -
Sto12g0212 153 Hamap 50S ribosomal protein L23 [rplW]. 73 153 IPR013025 GO:0003735|GO:0005840|GO:0006412
Sto12g0212 153 Pfam Ribosomal protein L23, N-terminal domain 14 63 IPR005633 -
Sto12g0212 153 Pfam Ribosomal protein L23 73 135 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0212 Sto-Chr12 1261773 1263565 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0212 1 153 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 87.013 2.95e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0212 K02893 - mnt:21408108 287.345