Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0205 ATGACTTTTGGTTTGGTGTACACGGTGTATGCAACTGCCGTAGATCCAAAGAAGGGTGACATTGGAACAATTGCTCCCATCGCCATTGGTTTTATTGTTGGTGCTAACATCTTGGCCGGTGGTGCCTTTGATGGTGCATCCATGAACCCAGCTGTGTCTTTCGGACCCGCTGTTGTTAGCTGGACATGGGCTAACCACTGGGTCTACTGGCTCGGTCCATTCATTGGTGCCGCAATTGCTGCCATTGTCTATGAGATATTCTTCATCAACCAAACCCACGAACAGCTTCCCACCACAGATTATTAG 306 0.4869 MTFGLVYTVYATAVDPKKGDIGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWLGPFIGAAIAAIVYEIFFINQTHEQLPTTDY 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0205 101 SUPERFAMILY Aquaporin-like 1 97 IPR023271 -
Sto12g0205 101 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 101 - -
Sto12g0205 101 Pfam Major intrinsic protein 1 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0205 101 PANTHER AQUAPORIN-8 1 101 IPR034294 -
Sto12g0205 101 PRINTS Major intrinsic protein family signature 30 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0205 101 PRINTS Major intrinsic protein family signature 67 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto12g0205 101 Gene3D Glycerol uptake facilitator protein. 1 101 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0205 Sto-Chr12 1224243 1224548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0205 1 101 Major Intrinsic Protein MIP AT2G36830 83.168 1.45e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0205 K09873 - mnt:21394129 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1108 7 9118910 9120996 Sto12g0205 12 1224243 1224548 CCT
Sto12g0205 12 1224243 1224548 Sto12g0205 12 1224243 1224548 ECH
Sto12g0205 12 1224243 1224548 Sto7g1108 7 9118910 9120996 ECH