Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0180 ATGGCTGGAAAAGGCGAGGGCCCGGCGATCGGAATCGACTTGGGGACGACATATTCTTGCGTTGGTGTGTGGCAGCATGATCGTGTGGAAATCATAGCAAATGATCAAGGCAACAGGACGACGCCGTCTTATGTTGCTTTCACTGATACTGAACGGTTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAATCCGACCAACACTGTTTTCGACGCTAAGCGTTTGATTGGTAGGCGTTTTAGTGATTCTTCAGTGATTGCTGGTCCTGGTGACAAACCTATGATTGTAGTGACATACAAGGGCGAAGAGAAGCAGTTTTCGGCTGAAGAGATCTCTTCCATGGTTCTCATGAAGATGAAAGAGATTGCGGAGGCCTATCTTGGTTCTACCATCAAGAACGCTGTTGTTACTGTGCCTGCATATTTCAATGACTCCCAGCGTCAAGCTACAAAAGATGCTGGTGTCATTTCTGGGCTCAATGTCATGCGTATTATTAATGAACCCACTGCTGCCGCCATTGCTTATGGACTTGATAAGAAAGCATCCAGCAGCGGTGAGAAGAACGTTCTGATTTTCGACCTAGGTGGTGGAACATTCGATGTTTCCCTTCTCACCATTGAAGAAGGTATTTTTGAGGTGAAAGCTACTGCTGGTGATACCCACCTGGGTGGTGAGGATTTTGACAACAGAATGGTGAACCATTTTGTTCAGGAGTTCAAGAGGAAGCACAAGAAGGATATTTCTGGGAACCCCAGAGCTTTGAGGAGGTTGAGAACTGCGTGTGAGAGGGCGAAAAGGACTCTCTCATCTACCGCCCAAACTACCATCGAGATTGATTCTTTATATGAAGGCATTGATTTCTACACAACTATAACTCGTGCGAGATTTGAAGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCTGTGGAGAAATGTTTGAGGGATGCTAGGATGGATAAAAGCAGTGTCCATGATGTTGTTCTTGTTGGTGGATCAACTAGAATTCCAAAAGTTCAACAACTGTTGCAGGATTTCTTCAATGGAAAAGAACTTTGCAAGAGCATTAACCCTGATGAGGCAGTTGCGTATGGTGCAGCTGTTCAGGCTGCCATCCTCAGTGGTGAGGGCAATGAGAAAGTACAGGACCTGTTGTTGCTAGATGTCACTCCTTTATCACTTGGTTTAGAGACAGCCGGAGGTGTTATGACTGTATTGATTCCTAGGAACACCACCATTCCTACCAAGAAGGAGCAAGTGTTTTCAACCTACTCTGATAACCAACCTGGTGTGTTGATTCAGGTCTATGAGGGTGAACGTACAAGAACACGTGATAACAATTTGCTCGGCAAGTTTGAGTTATCTGGAATTCCTCCTGCTCCAAGGGGAGTTCCACAAATCAATGTTTGTTTCGATATTGATGCTAATGGTATATTGAATGTGTCTGCGGAGGACAAAACCACAGGGCAGAAGAACAAGATTACAATTACTAATGATAAGGGCAGGCTTTCTAAAGAGGAGATTGAGAAGATGGTGCAGGAGGCTGAGAAGTACAAGTCTGAGGATGAGGAGCATAAGAAGAAGGTGGAGGCCAAAAATGCACTGGAGAATTACGCATATAACATGAGGAACACTATCAAGGATGACAAGATTGCATCCAAGCTGCCTGTTGCAGATAAGAAGAAGATTGAAGATGCAATTGAGGAAGCCATCCAATGGCTTGATGGAAACCAGCTTGCAGAGGCTGACGAATTGGAGGACAAGATGAAGGAGTTGGAGAGTATTTGCAACCCCATCATTGCTAAAATGTACCAAGGTGCTGGTGGTGATGCAGGTGGAGCCATGGATGAAGATGGTCCTTCAACTGGAGGAACCGGTGCTGGGCCTAAGATTGAGGAAGTAGATTAA 1914 0.4556 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDSSVIAGPGDKPMIVVTYKGEEKQFSAEEISSMVLMKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDARMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIASKLPVADKKKIEDAIEEAIQWLDGNQLAEADELEDKMKELESICNPIIAKMYQGAGGDAGGAMDEDGPSTGGTGAGPKIEEVD 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0180 637 MobiDBLite consensus disorder prediction 608 637 - -
Sto12g0180 637 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 617 - -
Sto12g0180 637 Gene3D - 10 373 - -
Sto12g0180 637 Pfam Hsp70 protein 9 607 IPR013126 GO:0005524|GO:0140662
Sto12g0180 637 Gene3D - 534 608 IPR029048 -
Sto12g0180 637 ProSitePatterns Heat shock hsp70 proteins family signature 3. 329 343 IPR018181 -
Sto12g0180 637 Gene3D - 71 115 - -
Sto12g0180 637 CDD HSPA1-2_6-8-like_NBD 9 376 - -
Sto12g0180 637 SUPERFAMILY Actin-like ATPase domain 186 377 IPR043129 -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 8 21 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 36 48 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 58 66 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 135 155 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 198 208 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 326 342 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 358 378 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 385 404 - -
Sto12g0180 637 PRINTS 70kDa heat shock protein signature 466 482 - -
Sto12g0180 637 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 381 538 IPR029047 -
Sto12g0180 637 SUPERFAMILY Actin-like ATPase domain 8 180 IPR043129 -
Sto12g0180 637 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 532 613 IPR029048 -
Sto12g0180 637 Coils Coil 510 530 - -
Sto12g0180 637 Gene3D Actin; Chain A, domain 4 224 307 - -
Sto12g0180 637 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 380 533 IPR029047 -
Sto12g0180 637 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sto12g0180 637 PANTHER HEAT SHOCK PROTEIN 70KDA 1 617 IPR013126 GO:0005524|GO:0140662
Sto12g0180 637 ProSitePatterns Heat shock hsp70 proteins family signature 2. 192 205 IPR018181 -
Sto12g0180 637 Gene3D - 181 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0180 Sto-Chr12 1069895 1072390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0180 1 637 Calmodulin-binding Proteins AT3G12580 91.692 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0180 K03283 - tcc:18590718 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0180 12 1069895 1072390 Sto12g0180 12 1069895 1072390 ECH
Sto12g0180 12 1069895 1072390 Sto7g1144 7 9475468 9478207 ECH
Sto8g0790 8 4999791 5002541 Sto12g0180 12 1069895 1072390 ECH
Sto13g3339 13 36807828 36810424 Sto12g0180 12 1069895 1072390 ECH