Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0179 atggaaggaggaggaggaggatcgAGTAATAGTAGTAGCAGTGGGAGTTCGCGATGGAACCCCACAAAAGAGCAAATAAGCATGTTGGAGAATCTGTATAAGCAAGGGATAAGGACGCCGAGTGCGGAGCAGATACAGCACATCACTGCTAGGCTCAGGGCCTACGGTCACATCGAAGGCAAGAATTGGTATGCGCTCCCTATTATCTGCCACACTGTGAAATGGGGTATTATCCTCAACATCAGAGGCTGCTTCTGCCGGGGAGGATGCCTCCAAACTATGATCATAGCCTGCAAGTACAAGTACAGCCGCCACAACAAACGCTTCCGCTTTTTCCTCTGCATCCAACTGGAATTCTCGAACCCAAACCAATTGATTCTGCCTCAGAAAACCACCCCCCCTTCTTtgattttctctcttcttcaacTCAAGACTTAA 438 0.4384 MEGGGGGSSNSSSSGSSRWNPTKEQISMLENLYKQGIRTPSAEQIQHITARLRAYGHIEGKNWYALPIICHTVKWGIILNIRGCFCRGGCLQTMIIACKYKYSRHNKRFRFFLCIQLEFSNPNQLILPQKTTPPSLIFSLLQLKT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0179 145 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 5 63 - -
Sto12g0179 145 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 63 IPR044555 GO:0003700|GO:0099402
Sto12g0179 145 SUPERFAMILY Homeodomain-like 9 53 IPR009057 -
Sto12g0179 145 MobiDBLite consensus disorder prediction 1 20 - -
Sto12g0179 145 Pfam Homeodomain 17 59 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0179 Sto-Chr12 1063712 1064388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0179 10 64 Wox Gene Family AT5G59340 74.545 1.18e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto12g0179 Homeodomain 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0179 - - thj:104811275 98.2117