Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0157 ATGACTTCCCTCTCACTCCTCAACTTCTCTGCTAACAGGTTAGCTTACGGAACTTGTGATCTTCAAGGAATTTCTGTTCTTGTTTCTGGAATGGGAATTTGTCTCAGCGCTCAAATTAAAGCTACTGATAGCCCCTGTAACTCTGGGTTGAATTCAAAACCTGGGAGCAGAGACGGCACAGGTAGTAAGGTCTCGACGGCCTCGCTGCCTCGCAGTAGTCGGAGTGAGGGTGAAATCTTGCAGTCATCCAATTTAAAGAGCTTTGCTTTATCAGAACTGAAGGCGGCCACCAGAAATTTCCGTCCAGATAGTGTTTTAGGAGAAGGTGGCTTTGGTTCTGTTTTCAAAGGGTGGATTGATGAGCATTCTTTGGCTGCTGCCAGACCTGACACTGGCATTATTGTTGCTGTCAAAAGGCTTAATCAAGATAGTAGCCAAGGTCACAATGAGTGGTTGGCTGAAGTCAACTATCTCGGACAATTTTCTCATCCCCATCTTGTAAAATTGATTGGCTATTGTCTGGAAGACGAACACCGCCTTCTGGTCTATGAATGTATGCCTCGAGGCAGCTTGGAGAATCATTTGTTCAGAAGAGGCTCTTATTTCCAACCTCTTTCCTGGAGCCTCCGTTTGAAGGTCGCTCTTGGTGCTGCCAAAGGCCTTGCATTTCTTCACAGCACTCAAACAAAAGTGATATTTAGGGACTTCAAGACTTCAAATATCTTGCTTGATTCaAATTACAATGCAAAACTTTCTGATTTTGGGCTGGCCAAGGATGGACCAACAGGGGACAAAAGTCATGTCTCCACCAGGGTAATGGGAACCTTTGGATATGCAGCTCCCGAGTATCTAGCCACTGGTCACTTAACTCCGAGAAGTGACGTGTATAGTTTCGGAGTAGTCCTATTGGAAATATTATCAGGTCGGCGTGCAGTGGACAAGAATCAACCATCAGGACAGCACAATTTGGTGGAGTGGGCTAAGCCATACTTGGCCAACAAACGTAAGCTTTCACGTGTGATGGATAACCGTCTCGAAGGTCAGTATTCAATGGATGTGGCCTACAAGGTAGCCACCCTGGCATTGCGATGCCTTTCCACAGAATCCAAGTTCAGGCCAAGCATGGACGAGGTCCTCACAACTATGGAGCAGCTTCAGGTTCCTAATGTAAATGATGGTAATAAAAAACCTTCTGTTGATAGATCTCGTGATCGGAGAACAAGTGAAGATAATGCTGCTAACCATGGGAGGACCACCATGGCTTATCCACGTCCCTCGGCTTCCCCTCTCTATGCTTGA 1299 0.4619 MTSLSLLNFSANRLAYGTCDLQGISVLVSGMGICLSAQIKATDSPCNSGLNSKPGSRDGTGSKVSTASLPRSSRSEGEILQSSNLKSFALSELKAATRNFRPDSVLGEGGFGSVFKGWIDEHSLAAARPDTGIIVAVKRLNQDSSQGHNEWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYECMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAAKGLAFLHSTQTKVIFRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTFGYAAPEYLATGHLTPRSDVYSFGVVLLEILSGRRAVDKNQPSGQHNLVEWAKPYLANKRKLSRVMDNRLEGQYSMDVAYKVATLALRCLSTESKFRPSMDEVLTTMEQLQVPNVNDGNKKPSVDRSRDRRTSEDNAANHGRTTMAYPRPSASPLYA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0157 432 SUPERFAMILY Protein kinase-like (PK-like) 73 380 IPR011009 -
Sto12g0157 432 Gene3D Phosphorylase Kinase; domain 1 75 185 - -
Sto12g0157 432 PANTHER OS01G0588500 PROTEIN-RELATED 50 416 - -
Sto12g0157 432 ProSitePatterns Protein kinases ATP-binding region signature. 106 138 IPR017441 GO:0005524
Sto12g0157 432 Gene3D Transferase(Phosphotransferase) domain 1 186 406 - -
Sto12g0157 432 CDD STKc_IRAK 106 385 - -
Sto12g0157 432 ProSiteProfiles Protein kinase domain profile. 100 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0157 432 MobiDBLite consensus disorder prediction 396 412 - -
Sto12g0157 432 Pfam Protein tyrosine and serine/threonine kinase 104 380 IPR001245 GO:0004672|GO:0006468
Sto12g0157 432 MobiDBLite consensus disorder prediction 46 76 - -
Sto12g0157 432 PANTHER KINASE 1B 50 416 - -
Sto12g0157 432 MobiDBLite consensus disorder prediction 382 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0157 Sto-Chr12 963891 965917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0157 71 382 Glycoside Hydrolase AT3G07070 47.284 5.12e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto12g0157 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0157 - - rcu:8286588 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1183 7 9921477 9926520 Sto12g0157 12 963891 965917 CCT
Sto12g0157 12 963891 965917 Sto12g0157 12 963891 965917 ECH