Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0150 ATGGTTTTGCAGAAGTTAGACTATGGATTTAGTGGTTATGAGGTGCCAACCACACCTCGAGCTACCCAATCAGCTAGGAGGAGTGCTGCACACCAAGAAATAGTGAAAGACAATCAAATGTCTGCATTTGACTTATTGGCCACTGTAGCTGGCAAATTATTGCAAGACAAAGAGACTTCAACTACTTCTAGTGATACATCATCAGAAAAGGATCAGTATGGATTTGTTATGGAAGAGAGCCTGACTCCAAATAAGCCACTGAAAGCTGAGCCATCTGATGAAGGAAGTTGTGACCAACGATTTTTCTCTGATCATTCTTCACAAACATATGATCAAAATTGTACTTTGAAAGGAATTGCAGATCCTGAAAATGATGGCCATTCAGGCATGGCTTCCGAAGTAACAAATTCTAGTTGCTCGTTGCTGAATGGCAAAAGCCATAATCAAATGGAAAATTTAGTTAGCATAGTTGAATTAGATTCCTCTGGGTCTGCAGAGTTTAGAGATTGCAAGTTAGATAGTGATATATGTAACGTAAAGGATGTGCAGATTGGGAATGTGCCCATAGGTATGGGGACTGAGAAGTGCAGTTTTGAAGATCCTTTGGATGAAAAATCTCTTGCACTTTTTAGTTCAGGTGGCACTGCCAAGTTGTCTGGATCTGATGACAATATTCCTTATAGCACATTGTCCAAAGATTGTGATAATGTACCTTTAGATAGTAGAGATGATGACGAAAATTGTTTCAGCTGTACTCACCCTAGTACCAAAGCAAAGTCCTTTAGGACAATGACCCATATAGGTAATAGAAGAATAAGGAAAATACTGGCTTCTAAAAATTGGAAAACTTCTTCAGAATCAAAGGATGATAAACTTCTTGATAGAGatGGAAATTTGAAGCTTATTTACCACAATAGGAAGAACTGTTATAGACACCAAAGATCTGAAATGAATATTCCATTCAAAAAGAGGAAGCTTTTTTATCACAGGTCCGTCTCAATTTCTGATGAGTTTATCAGAAGTGATGGCAATTGCCATTCATTTGAGAAGGTCATGAGTCAAGATGCGTCTGGTTCATCTCCTAGGATTCATGGAGACCCTGGAATTTCATCTTTGGAAGCGCGTCAAAGAAATGGATTACAATGTAGAGATTCACATGTGAAGCTTAGGATCAAGTCATTTAGAGTACCGGAGCTTTTTATTGAGATTCCAGAAACTGCAACTATTGGATCCTTGAAGAGGACAGTGATGGAAGCAGTGACTGCTATCCTTGGAGGTGGATTACATGTTGGTGTAATTCTCCAGGGAAAGAAAGTTAGAGATGACAATAAAACTCTAATTCAAACCGGAATTTCTCGTGATAATCACCTCGATGCTCTGGGCTTTACCCTGGAACCTAATTCTAAGAGCATAACTTCCCATGGCTATCCTTCCACATCCAGTCAAAGCCTAGTTCAGCAGAACATTCAGTGCAGTTCTGACACAGTAGCTGAGCATCAAGTAACAAGCTTAAGTAACCTTGTTGAAAGTGATGACGATTCAGAACTTCCACCTACTATTAACACATTTGGTGATAAAAGTATGACAGATTCTAAAGCGCTAGTTACTGTTCCTGAGACGGGGATGGAGGCAGTAACTGCAATAGCCATGCATGAGAAGACGAAAAGATCTGAGGTTGTGCAGCGCCGCATTCGTAGGCCTTTTTCTGTTGCGGAAGTTGAAGCATTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGCGATGTCAAACTATGTGCTTTTGATAATGCGGAGCATCGGACTTACGTGGATTTAAAGGATAAATGGAAAACACTGGTTCACACGGCAACAATATCCCCTCAGCAAAGGAGAGGACAGCCTGTCCCTCAACAGCTTTTGGACAGGACTGACAGGTGA 1923 0.4072 MVLQKLDYGFSGYEVPTTPRATQSARRSAAHQEIVKDNQMSAFDLLATVAGKLLQDKETSTTSSDTSSEKDQYGFVMEESLTPNKPLKAEPSDEGSCDQRFFSDHSSQTYDQNCTLKGIADPENDGHSGMASEVTNSSCSLLNGKSHNQMENLVSIVELDSSGSAEFRDCKLDSDICNVKDVQIGNVPIGMGTEKCSFEDPLDEKSLALFSSGGTAKLSGSDDNIPYSTLSKDCDNVPLDSRDDDENCFSCTHPSTKAKSFRTMTHIGNRRIRKILASKNWKTSSESKDDKLLDRDGNLKLIYHNRKNCYRHQRSEMNIPFKKRKLFYHRSVSISDEFIRSDGNCHSFEKVMSQDASGSSPRIHGDPGISSLEARQRNGLQCRDSHVKLRIKSFRVPELFIEIPETATIGSLKRTVMEAVTAILGGGLHVGVILQGKKVRDDNKTLIQTGISRDNHLDALGFTLEPNSKSITSHGYPSTSSQSLVQQNIQCSSDTVAEHQVTSLSNLVESDDDSELPPTINTFGDKSMTDSKALVTVPETGMEAVTAIAMHEKTKRSEVVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFDNAEHRTYVDLKDKWKTLVHTATISPQQRRGQPVPQQLLDRTDR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0150 640 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 637 IPR031105 -
Sto12g0150 640 ProSiteProfiles Myb-like domain profile. 560 615 IPR001005 -
Sto12g0150 640 CDD SANT_TRF 566 616 - -
Sto12g0150 640 SUPERFAMILY Homeodomain-like 562 632 IPR009057 -
Sto12g0150 640 SUPERFAMILY Ubiquitin-like 384 469 IPR029071 -
Sto12g0150 640 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 619 IPR017930 -
Sto12g0150 640 Gene3D - 553 640 - -
Sto12g0150 640 SMART sant 564 617 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0150 Sto-Chr12 930190 933316 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0150 - - gmx:100780881 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0150 12 930190 933316 Sto12g0150 12 930190 933316 ECH
Sto12g0150 12 930190 933316 Sto5g1628 5 11455882 11459001 ECH
Sto6g0628 6 6625769 6629433 Sto12g0150 12 930190 933316 ECH