Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0149 ATGAGCTTGGGATCTATGGATAGTTCATTTTTTCCATCTGAAAATTATGCTTCCCCCTCTACCTTTAGTACAGATGAGGATTCTCCCTTGGATGAGATTGACTTTTCTGGTACTGTCCTTCGCTACATAAACCAAATGCTTATGGAAGAGGACATGCAAGAGAAGCCCTGTATGTTTCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCGTTCTATGAGGTTATTGGTGAGAAGTACCCTTCTTCCTCCACCCAACATTATCTTCAAAATTATCATAATGTCGATGACAATGTCTCTGGTAGATTCAGTGATTTTAGTAGCGCCGACACTAGTAAATCTAATGATTCCCAGTTGAGTAATGCTCATGTTACTGGCTACAACAAGCCTTCTATATTTGAAACCGCTTTTCCTGCTAATTTTGTGTTTCAGTCCAATCCAATATCCAGTGCACAAGCTTCCATCGCCAATAGGAGTAGCTACACTAATAGCCAAAATGGGACTGTTGGGTCTTTCATGACCGAATCATTGGAGTCTTCATTGCTTAGCAAGAGTGAGTCTGTATTGCAATTTGAGAGAGGTGTAGAGGAAGCCAATAAGTTTCTTCCTAAGGATAACCCATTGATTATTAATCTGGAGAGTAACACTTTTTCTCCCCCTTTTAGAAGGAATCAGCAGATGGGAATTAAGACAGAGAAAAGTGACAGGGAGCACTTGCTATCTTATTCAAAAGGGAGCAAGAATCATGAGCGGGAAGATGAAACCTATTTAGAAGATGGGAGAAGCAACAAGCAGTCAGCAGTATATGTGGATGATCATGACCTTCCAGAATTATTTGATAAGGTACTTCTTGGTACTGGTTGTGGAAAAGATGAACGTCCTATGTGTATTTCCAGTGAAAACCGCCAGAGTGGACCAGGTCCAGACATGAATGTGCAACAAAATGAAGAATCAAATAAATCCCATAATGGGAAGGCTCGTGTTAAAAAACagaataagaaaaaggaagTTGTGGATCTGAGGACAACACTGATTCTGGGTGCACAAGCTGTTTCATCAGATGATCGTATAACCTCTAATGAGTTATTAAAGCAAATCAGGCAGCATTCTAGTCCCCTTGGTGATGGATCTCAGAGGTTGGCTCATTGCTTTGCAAACGCCCTTGAAACACGCTTGGCTGGCACTGGTACCCAGATTTATACTGCTTTATCCTCCAAAAGAACTTCTGCTGCTGACATGTTAAAAGCTTACCATATGTATCTTTCAGCTTGCCCCTTCAAGAAGCTTGCAATCATCTTTGCAAACCATACCATTTTGAGTCTGGCCAAAGGTGTAGAAACCCTTCACATTGTAGATTTTGGTATCCGTTATGGCTTCCAGTGGCCTGCTCTTATCTACCGTCTCTCTAAACAACCCGGCGGCCCCCCAAAGCTTCGTATCACCGGGATAGAGCTACCGCAACCCGGTTTCAAGCCGGCTGAGAGAGTCCAGGAGACAGGGTGTCGCCTGGCTAGGTATTGTGAGCGTTTCAATGTTCCATTTGAGTATAATGCCATTGCACAAAAGTGGGAAACCATCAAAGTTGAAGACctgaaaataaaggaaaatgaactTGTAATTGTGAACTGTTTGGTTCGATTCAAGAACCTACTTGATGAGACAGTGGTGTTGAATAGTCCAAGGGATGCAGTTTTAAATGTAATTAGACAAATAAATCCCAATGTATTCATACATACCAGTGTGAATGGGTGTTATAATGCACCGTTCTTTGTGAGCCGGTTCAGGGAGGCTCTGTTTCACTACTCTTCAATGTTTGATATGCTTGACAGCAATGTGGGTCGTGAAGATCCAATGAGGTTGATGTTTGAGAAAGAGTTCTTTGGGCGAGAGGTAATGAATATTGTAGCATGTGAGGGTTGTGAGAGGATAGAGAGGCCAGAGACATACAAGCAATGGCAGGTAAGGAACATGAGGGCTGGGTTTAGGCAGGTAGGCTTGGATAAACAACTGATTAACAAATTAAGGGGCAAGTTGACAAGTGCTTACCACAGTGATTTCATGCTTAACGAAGATGGAAACTGGATGCTGCAAGTAGCCCTAGAATTTAGCACAAGTCGTGGTGGATACTTGGTTTATGCTGTTCTTCACTTGCGAGGTTCGAGGAATCCCTCAAGCATATTCTGGTGTTGTTGCCACATCTACGACTTTGATTGTCGTTTGTTTTGTTTATTCTCTGATTAA 2241 0.4168 MSLGSMDSSFFPSENYASPSTFSTDEDSPLDEIDFSGTVLRYINQMLMEEDMQEKPCMFHDSLALQAAEKSFYEVIGEKYPSSSTQHYLQNYHNVDDNVSGRFSDFSSADTSKSNDSQLSNAHVTGYNKPSIFETAFPANFVFQSNPISSAQASIANRSSYTNSQNGTVGSFMTESLESSLLSKSESVLQFERGVEEANKFLPKDNPLIINLESNTFSPPFRRNQQMGIKTEKSDREHLLSYSKGSKNHEREDETYLEDGRSNKQSAVYVDDHDLPELFDKVLLGTGCGKDERPMCISSENRQSGPGPDMNVQQNEESNKSHNGKARVKKQNKKKEVVDLRTTLILGAQAVSSDDRITSNELLKQIRQHSSPLGDGSQRLAHCFANALETRLAGTGTQIYTALSSKRTSAADMLKAYHMYLSACPFKKLAIIFANHTILSLAKGVETLHIVDFGIRYGFQWPALIYRLSKQPGGPPKLRITGIELPQPGFKPAERVQETGCRLARYCERFNVPFEYNAIAQKWETIKVEDLKIKENELVIVNCLVRFKNLLDETVVLNSPRDAVLNVIRQINPNVFIHTSVNGCYNAPFFVSRFREALFHYSSMFDMLDSNVGREDPMRLMFEKEFFGREVMNIVACEGCERIERPETYKQWQVRNMRAGFRQVGLDKQLINKLRGKLTSAYHSDFMLNEDGNWMLQVALEFSTSRGGYLVYAVLHLRGSRNPSSIFWCCCHIYDFDCRLFCLFSD 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0149 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 697 IPR005202 -
Sto12g0149 746 MobiDBLite consensus disorder prediction 294 333 - -
Sto12g0149 746 Pfam GRAS domain family 341 696 IPR005202 -
Sto12g0149 746 ProSiteProfiles GRAS family profile. 331 716 IPR005202 -
Sto12g0149 746 MobiDBLite consensus disorder prediction 229 263 - -
Sto12g0149 746 PANTHER SCARECROW-LIKE PROTEIN 14 13 697 - -
Sto12g0149 746 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0149 Sto-Chr12 926441 928867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0149 39 713 GRAS Transcription Factor Family AT1G07530 55.811 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto12g0149 GRAS 2.6e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0149 - - ahf:112736647 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1202 7 10196904 10199141 Sto12g0149 12 926441 928867 CCT
Sto12g0149 12 926441 928867 Sto12g0149 12 926441 928867 ECH
Sto12g0149 12 926441 928867 Sto7g1202 7 10196904 10199141 ECH
Sto6g0625 6 6614620 6617084 Sto12g0149 12 926441 928867 ECH