Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0145 ATGGATACTCTTCTGGAAAACTTTCGTGGTGGCGTAAATGGATTTAGATTTGAGAACGGTCATATTTCGGGTTTTGCAAACCAGAACCAAGTAAACGGCTTCAACTTCGATGATAAACCCATCGATTCATCTGTCCTTCCAACCAATTCACAATCTCCCACTGATTCCgctccttcctcttcctcttcctcttcctcttctagAACCAGCTCAAACCAAGAATCTGGAGGGAGTAATAAATACTCCAATCCAATTCTCGGATTCATAAGTGAGATCCTTATGGATGAAGAAGACGACCTGGAGCGCAAGCCTTGCATGTTGCAAGATTGCCTGGCACTCCAGGCTGCCGAGAAATCATTCTACGATGTTCTTGGTCGTAGCTACCCCTCTTCTCCACGTCAAAACCCTAATTGCTTCCCTGGTGAAATGATCAATAGCCCAGATGATCAAAACTTTGGTCGCACCCCTAGTTTTGAGAGCAATAGCAGCTATACAACCGATAATTCATCCGACTCCGATTGGATTAACGGTGTCGTTAATTCCCCAGAAAACATACTCGAGATTCCAGATGTAGCTTCTGATCCATTTACAGAAACCCTAGCTCAGAGCAACCAGCTGATCAGTCTTGCGGATGGCATGCTTAATTCAATTCCCAAGGGAACAGGGGAAAAGAGAAGCCATTGGATGGATGGTGCTATAAAcgaagaaggaggaagaggcAACAAACTTTCTGCTGTCTATTCTGATGATTCAGAGCCATCGGAGATGTTCGATGAGGTACTGCTGTGTGGTCATACAACTAGTCAATCCATGACATGTTCTGGTCCCGATCCTTCACAAAATGGCATATTACATCGGAATGTTGATTCTGGAGGATCAAACGGGAAGCAAAAGCGTTCAAAGAAGGGAGGTAACAAGGGCACACCAGTGGATTTATGGACTCTGCTAACCCAATGTGCACAGGCAGTGGCAAGCTATGACCAAAGGAATGCAAATGAGCTTCTGAAGCAGATTAGGCAGCACTCTTCTCCTTTTGGCGATGGAATCCAACGTTTAGCTCATTACTTTGCGAATGGGCTTGAGATGCGTCTGGCTCCTGGAACACCATCGTATACATCCCTTGACTGCGGGGCAACTGCTGCTGAGATGTTAAAAGCTTACAAGCTCTACATCACAGCATCACCTTTCCAGAGGGTATCGAATCTCGTGGCTAACAGAACAATTCTGAATCTCGTAAAAGATGAAACCAGCCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCATTATTCATCGTCTTTCAGAGAGACAGGGTGGGCCTCCAAAGCTCCGTATAACAGGAATTGATTTTCCCCAATCTGGGTTTCGCCCTTCAGAGAGAATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGTTTGGTGTTCCTTTTGAATACAATTGCTTGGCACAGAAATGGGAAACCATCCAACTGGAGGATCTCAAAATCGACAGAAATGAATTAACGGTGGTGAACTGTTTGTACCGGCTGAAGAACCTGCCTGATGAAACTGTGTCCGTGAACAGTCCTAGAGATGCTGTTTTGAAGTTGATAAGGAGGATCAATCCAAATATCTTCATTCATGGGATTCTCAATGGCAACTACAATGCACCATTTTTCGTCACTCGATTTAGGGAGGCTTTGTTCCATTACTCATCTCTGTTTGATATGTTTGAGGCAAATGTGACTCGTGAAAATGAAGAGAGGCTGATGTTTGAGAAAGGGATATTTGGAAGGGATGCCATGAATGTTATAGCATGTGAAGGGACAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAGTGGCAGGTTAGGAATCGAAGAGCAGGGTTCAAGCAAATCCGATTGGATCCTGAACTCTTAGACAGAGCAAAAGACATGGTGAAGACGGAATATCATAAAGATTTTGTAGTGGATGCGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATCATTTATGCTATCTCTTGTTGGAAACCTGCTTAA 2052 0.4327 MDTLLENFRGGVNGFRFENGHISGFANQNQVNGFNFDDKPIDSSVLPTNSQSPTDSAPSSSSSSSSSRTSSNQESGGSNKYSNPILGFISEILMDEEDDLERKPCMLQDCLALQAAEKSFYDVLGRSYPSSPRQNPNCFPGEMINSPDDQNFGRTPSFESNSSYTTDNSSDSDWINGVVNSPENILEIPDVASDPFTETLAQSNQLISLADGMLNSIPKGTGEKRSHWMDGAINEEGGRGNKLSAVYSDDSEPSEMFDEVLLCGHTTSQSMTCSGPDPSQNGILHRNVDSGGSNGKQKRSKKGGNKGTPVDLWTLLTQCAQAVASYDQRNANELLKQIRQHSSPFGDGIQRLAHYFANGLEMRLAPGTPSYTSLDCGATAAEMLKAYKLYITASPFQRVSNLVANRTILNLVKDETSLHIIDFGICYGFQWPCIIHRLSERQGGPPKLRITGIDFPQSGFRPSERIEETGRRLANYCRRFGVPFEYNCLAQKWETIQLEDLKIDRNELTVVNCLYRLKNLPDETVSVNSPRDAVLKLIRRINPNIFIHGILNGNYNAPFFVTRFREALFHYSSLFDMFEANVTRENEERLMFEKGIFGRDAMNVIACEGTERVERPETYKQWQVRNRRAGFKQIRLDPELLDRAKDMVKTEYHKDFVVDADGKWVLQGWKGRIIYAISCWKPA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0145 683 Pfam GRAS domain family 314 681 IPR005202 -
Sto12g0145 683 MobiDBLite consensus disorder prediction 269 307 - -
Sto12g0145 683 MobiDBLite consensus disorder prediction 148 173 - -
Sto12g0145 683 MobiDBLite consensus disorder prediction 269 298 - -
Sto12g0145 683 MobiDBLite consensus disorder prediction 36 82 - -
Sto12g0145 683 MobiDBLite consensus disorder prediction 131 173 - -
Sto12g0145 683 ProSiteProfiles GRAS family profile. 303 681 IPR005202 -
Sto12g0145 683 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 59 681 - -
Sto12g0145 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 681 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0145 Sto-Chr12 907742 909793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0145 32 682 GRAS Transcription Factor Family AT2G29060 46.224 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto12g0145 GRAS 3.3e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0145 - - gmx:100815586 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0145 12 907742 909793 Sto7g1206 7 10229668 10233602 CCT
Sto12g0145 12 907742 909793 Sto12g0145 12 907742 909793 ECH