Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0137 ATGTCTTTAACTGCAAACTACTTTGTTTGTTCTCTTCGACCTACCCTTGTTTACCACCACAGCGTACCCACTTGTAATTTGAGCTCCTTTTCATTCCAATCACAACCTTCTTATTCACGCAACTCGAAGAAGAAAACAAGAGGTGTTGTCAGTCTTGTTAAAGCTAGCCTTGGTTACTCTCCTTATGATGTCTTGGGTGTATCTCCCAATGCAACTGTGGATGAAATCAAGAAGGCATATAGGAAACTTGCTCTCAAGTATCACCCCGATGTCAATAAAGAGGATAAAGCACAGCAGAAGTTTATGAGGATAAAAAATGCATACAATACATTGTTAAATTCTACCTCCCGTAGAAAATATGATTCTGGATATGGCAGTTCGGATTTTTCATATTATTCTGCTCaaagaaatcaaagaaaaaattcCAAAGCCGAAGAAGAATTTTATGGATTAGAGAACTTCTTTAAAGACCTTCAAGAAGAATTCAAGAACTGGGAAGCAAATGCTGCTTCACAAGGGAAACCAAAGAGCCTATGGGAGGAATTGGCTGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAAAAAGAACTCAATGTGGCTGATTCAGAAATTGATCAAAATAACAATGATAAAAAGCCTCAGGCAGGAAATTCTTCTCAAACTTCTGGGACAGAGACACCAGGAAATGGCACACAGAATGAAGCTGTCAGAGGAAACAGCAACACTGAGGATAACGATGATGACATAGAAGCCACTCTTGCTCAGTTAAAAAAGGAATTAGGCTTATAG 789 0.3802 MSLTANYFVCSLRPTLVYHHSVPTCNLSSFSFQSQPSYSRNSKKKTRGVVSLVKASLGYSPYDVLGVSPNATVDEIKKAYRKLALKYHPDVNKEDKAQQKFMRIKNAYNTLLNSTSRRKYDSGYGSSDFSYYSAQRNQRKNSKAEEEFYGLENFFKDLQEEFKNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNVADSEIDQNNNDKKPQAGNSSQTSGTETPGNGTQNEAVRGNSNTEDNDDDIEATLAQLKKELGL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0137 262 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Sto12g0137 262 Coils Coil 190 210 - -
Sto12g0137 262 Coils Coil 239 259 - -
Sto12g0137 262 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 25 260 - -
Sto12g0137 262 MobiDBLite consensus disorder prediction 209 239 - -
Sto12g0137 262 SMART dnaj_3 59 116 IPR001623 -
Sto12g0137 262 Gene3D DnaJ domain 59 172 IPR036869 -
Sto12g0137 262 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 25 260 - -
Sto12g0137 262 PRINTS DnaJ domain signature 62 80 IPR001623 -
Sto12g0137 262 PRINTS DnaJ domain signature 80 95 IPR001623 -
Sto12g0137 262 PRINTS DnaJ domain signature 96 116 IPR001623 -
Sto12g0137 262 MobiDBLite consensus disorder prediction 205 249 - -
Sto12g0137 262 CDD DnaJ 61 113 IPR001623 -
Sto12g0137 262 Pfam DnaJ domain 61 121 IPR001623 -
Sto12g0137 262 ProSiteProfiles dnaJ domain profile. 60 124 IPR001623 -
Sto12g0137 262 SUPERFAMILY Chaperone J-domain 30 120 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0137 Sto-Chr12 867631 869713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0137 62 122 C2H2 Transcription Factor Family AT1G74250 38.806 7.91e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0137 - - adu:107461539 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0137 12 867631 869713 Sto12g0137 12 867631 869713 ECH