Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto12g0128 | ATGGTGGCGACCCAAAACCCTTCTCAACCGGCAAAGCTACGGTGGGGTGAGCTCGATGAGGATGATGGTGAGGATCTTGACTTTTTGCTGCCGCCGCGACAGGTGATTGGCCCCGACGAGAACGGCATAAAGAAGGTGATTGAATACAAATTCAACGAAGATGGCAATAAGGTTAAGATCACTACCACCACTCGTACGCGCAAGCTTGCTAACGCTCGCCTTAGTAAGCAGGCCATTGAGAGGCGATCTTGGGCAAAGTTTGGCGATGCTGTTCACGAGGATGTTGGTAGCAGGCTCACCATGGTGTCCACCGAAGAGATCCTCCTTGAGCGACCTAGGGCTCCcgGAAGCAAACCAGAAGAACCAAAGGTTGCTGGAGACCCATTGGCTCAGTTTCAAAAAGGTGCTGTCCTCATGGTCTGTCGGACTTGTGGGAAAAAGGGTGACCATTGGACATCAAGGTGTCCATACAAGGATCTTGCCCAACCAGTGGAGGCATTTATCGACAAGCCTGCTGGATCAGAAGCTGCGGCTGCTGCTTCTGGTCCAGCTAAGGGGGCATATGTCCCCCCTGGTATGAGAGCAGGTGCAGAAAGGACTGGCTCAGATATGCGGCGTAGGAATGACGAAAATTCTGTAAGGGTCACCAACCTCTCAGAGGACACAAGAGAGCCCGATTTGCTTGAGCTGTTCCGTCCGTTTGGTGCTGTAAGCAGAGTCTATGTTGCTGTTGATCAAAAGACTGGTATGAGCAGAGGATTTGGTTTTGTTAACTTTGTTAACAGGGAAGATGCTCAGAGAGCTATTAACAAACTCAACGGTTATGGTTATGACAATCTCATCCTTAGAGTTGAATGGGCCACCCCAAGGGCAAACTAA | 879 | 0.5028 | MVATQNPSQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRTRKLANARLSKQAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEAFIDKPAGSEAAAAASGPAKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAN | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto12g0128 | 292 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 10 | 292 | - | - | |
Sto12g0128 | 292 | PIRSF | Transl_init_eIF-3_RNA-bind | 4 | 292 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Sto12g0128 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 213 | 279 | IPR000504 | GO:0003723 | |
Sto12g0128 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 211 | 289 | IPR000504 | GO:0003723 | |
Sto12g0128 | 292 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 10 | 292 | - | - | |
Sto12g0128 | 292 | SMART | rrm1_1 | 212 | 285 | IPR000504 | GO:0003723 | |
Sto12g0128 | 292 | MobiDBLite | consensus disorder prediction | 199 | 213 | - | - | |
Sto12g0128 | 292 | CDD | eIF3G | 41 | 159 | IPR024675 | - | |
Sto12g0128 | 292 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 12 | 291 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Sto12g0128 | 292 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 34 | 160 | IPR024675 | - | |
Sto12g0128 | 292 | Gene3D | - | 174 | 292 | IPR012677 | - | |
Sto12g0128 | 292 | MobiDBLite | consensus disorder prediction | 179 | 213 | - | - | |
Sto12g0128 | 292 | CDD | RRM_eIF3G_like | 212 | 287 | IPR034240 | - | |
Sto12g0128 | 292 | SUPERFAMILY | RNA-binding domain, RBD | 209 | 291 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto12g0128 | Sto-Chr12 | 829671 | 831686 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto12g0128 | 11 | 290 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 70.192 | 1.48e-155 | 435 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto12g0128 | K03248 | - | jre:108998481 | 509.99 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto12g0128 | 12 | 829671 | 831686 | Sto12g0128 | 12 | 829671 | 831686 | ECH |