Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0128 ATGGTGGCGACCCAAAACCCTTCTCAACCGGCAAAGCTACGGTGGGGTGAGCTCGATGAGGATGATGGTGAGGATCTTGACTTTTTGCTGCCGCCGCGACAGGTGATTGGCCCCGACGAGAACGGCATAAAGAAGGTGATTGAATACAAATTCAACGAAGATGGCAATAAGGTTAAGATCACTACCACCACTCGTACGCGCAAGCTTGCTAACGCTCGCCTTAGTAAGCAGGCCATTGAGAGGCGATCTTGGGCAAAGTTTGGCGATGCTGTTCACGAGGATGTTGGTAGCAGGCTCACCATGGTGTCCACCGAAGAGATCCTCCTTGAGCGACCTAGGGCTCCcgGAAGCAAACCAGAAGAACCAAAGGTTGCTGGAGACCCATTGGCTCAGTTTCAAAAAGGTGCTGTCCTCATGGTCTGTCGGACTTGTGGGAAAAAGGGTGACCATTGGACATCAAGGTGTCCATACAAGGATCTTGCCCAACCAGTGGAGGCATTTATCGACAAGCCTGCTGGATCAGAAGCTGCGGCTGCTGCTTCTGGTCCAGCTAAGGGGGCATATGTCCCCCCTGGTATGAGAGCAGGTGCAGAAAGGACTGGCTCAGATATGCGGCGTAGGAATGACGAAAATTCTGTAAGGGTCACCAACCTCTCAGAGGACACAAGAGAGCCCGATTTGCTTGAGCTGTTCCGTCCGTTTGGTGCTGTAAGCAGAGTCTATGTTGCTGTTGATCAAAAGACTGGTATGAGCAGAGGATTTGGTTTTGTTAACTTTGTTAACAGGGAAGATGCTCAGAGAGCTATTAACAAACTCAACGGTTATGGTTATGACAATCTCATCCTTAGAGTTGAATGGGCCACCCCAAGGGCAAACTAA 879 0.5028 MVATQNPSQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRTRKLANARLSKQAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEAFIDKPAGSEAAAAASGPAKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAN 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0128 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 10 292 - -
Sto12g0128 292 PIRSF Transl_init_eIF-3_RNA-bind 4 292 IPR017334 GO:0003743|GO:0005737|GO:0005852
Sto12g0128 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 213 279 IPR000504 GO:0003723
Sto12g0128 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 211 289 IPR000504 GO:0003723
Sto12g0128 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 10 292 - -
Sto12g0128 292 SMART rrm1_1 212 285 IPR000504 GO:0003723
Sto12g0128 292 MobiDBLite consensus disorder prediction 199 213 - -
Sto12g0128 292 CDD eIF3G 41 159 IPR024675 -
Sto12g0128 292 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 12 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
Sto12g0128 292 Pfam Eukaryotic translation initiation factor 3 subunit G 34 160 IPR024675 -
Sto12g0128 292 Gene3D - 174 292 IPR012677 -
Sto12g0128 292 MobiDBLite consensus disorder prediction 179 213 - -
Sto12g0128 292 CDD RRM_eIF3G_like 212 287 IPR034240 -
Sto12g0128 292 SUPERFAMILY RNA-binding domain, RBD 209 291 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto12g0128 Sto-Chr12 829671 831686 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0128 11 290 Eukaryotic Initiation Factors Gene Family AT3G11400 70.192 1.48e-155 435
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0128 K03248 - jre:108998481 509.99
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0128 12 829671 831686 Sto12g0128 12 829671 831686 ECH