Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0127 ATGGAACATGAGGAAGCACCTGTCTTGGAACCAAGGTCCATGCAGCAAATTGAGATACCAGTTGCCTCTGAAAGTCTTGTTCTTCCTATGGCAATGCAGTCATCTTGCGGTTCCGTTTGCCCTTTTTCCCAACAAGAACATAGTCTTTTGGCATCACAAGAGTCATCGAAGTCGGCCAAGAAACTTTGTGGACTCGTAGTTTTCTATACAATGGTTATGCTTATGGAAGTTGTTGGTGGTCTGAAAGCCAATAGCCTAGCAGTAATGAGTGATGCTGCACATTTGCTTTCAGATATTACTGGATTCTTAATCTCTCTCTTTGCAGTATGGGCATCAAGTTGGGAGCCAACGGCACATCAATCATTTGGATACAATCGCCTTGAGGTTTTAGGGGCTCTTTTCTCTGTGCAGTTAATTTGGCTAATATctggtttttttatatatgaagcAGTTGGTAGACTTGTTCACAGAAATGGCAGAGTGAATGGAATGCTCATGCTTGCAATTGCAGCATTTGGGTTTGTTCTTAACTTACTTATGGTCGTGTGGCTTGGTCATGATCacagtcatcatcatcatcatcatcatagtgACCATCATGATCATGATGATGGGTGTGGAGACTCAGAGCTGCATAACAAAACAAATGAAGAGAAGCTTAATCTTGTATCAAGCCATCCTAAAGAAAAGAATGTGTTAAACATAAATCTGCAAGGGGCTTATCTGCATGTGTTGGCAGATATGATTCAATCTGTTGGGGTGATGATAGCTGGAGCAATAATTTGGGCTAAACCAGATTGGTTAGTGGTTGACCTGATGTGTACTCTCATATTCTCTGTTATATCTCTAGGTACGACACTATCCACGCTCAAGAATATATATGGCATTCTGATGGAGAGGACACCGGGTGAGATCAATGTGATTGAGCTGGAAAATGGCCTCAAGGGTATGAAGGGGGTACAAGATATTCATGACTTGCATGTTTGGGCCATAACACTTGGTAAAATTGTTCTATCTTGTCATGTAGTAGCTGAGCCTGGGATCACTTCTACTGATCTACTCAACAAGATAAGGCATTACTGTGAAAAAACACACAAAATTCATCATGTAACCATACAAATTGAGTAA 1128 0.3945 MEHEEAPVLEPRSMQQIEIPVASESLVLPMAMQSSCGSVCPFSQQEHSLLASQESSKSAKKLCGLVVFYTMVMLMEVVGGLKANSLAVMSDAAHLLSDITGFLISLFAVWASSWEPTAHQSFGYNRLEVLGALFSVQLIWLISGFFIYEAVGRLVHRNGRVNGMLMLAIAAFGFVLNLLMVVWLGHDHSHHHHHHHSDHHDHDDGCGDSELHNKTNEEKLNLVSSHPKEKNVLNINLQGAYLHVLADMIQSVGVMIAGAIIWAKPDWLVVDLMCTLIFSVISLGTTLSTLKNIYGILMERTPGEINVIELENGLKGMKGVQDIHDLHVWAITLGKIVLSCHVVAEPGITSTDLLNKIRHYCEKTHKIHHVTIQIE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0127 375 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 375 - -
Sto12g0127 375 Gene3D Cation efflux protein transmembrane domain 59 297 IPR027469 -
Sto12g0127 375 TIGRFAM CDF: cation diffusion facilitator family transporter 60 375 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Sto12g0127 375 Pfam Cation efflux family 66 298 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Sto12g0127 375 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 299 IPR027469 -
Sto12g0127 375 PANTHER METAL TOLERANCE PROTEIN B 1 375 - -
Sto12g0127 375 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 375 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0127 Sto-Chr12 824053 825180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0127 1 375 Inorganic Solute Cotransporters AT2G29410 48.294 1.62e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0127 K14689 - gmx:100777590 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0127 12 824053 825180 Sto12g0127 12 824053 825180 ECH