Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0116 ATGGGAGCTCGCTGCTCTAAATTCTCACTGTGCTGGTGGTCGTCTAGTATCAAATCAAATCTTCAAGACTTATCTGATAATGATGATGGGAACCAGAATGAGAAGCTTGGATTCACAGAGTACAGCATGGATCAACTAAgaagtgccacttcaggatttTCACCCGACAACATTGTATCAGAGCACGGCGAGAAAGCTCCCAATGTTGTCTACAAAGGGAAGCTTGAAGAAGACAGGTGGATTGCTGTAAAGCGCTTCAACAAGTCGGCTTGGCCTGATTCTCGACAATTCCTAGTTCGTgaGGAAGCACGAGCAGTGGGGCAGCTTCGGAATGAGAGATTGGCGAACCTGATGGGATGTTGCTGTGAAGGAGAAGAGAGACTGCTTGTTGCTGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCATTGTAGAACTGCTCTGTTAGGGGAGACCCAGCCCATGAAATGGGGAATGAGGCTGAGAGTGGCCTTTTACTTGGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTATACCATGATCTTAATGCCTATAGAATTTTGTTTGATCAGGATGGTAATCCCAGACTCTCTTGTTTTGGACTCATGAAGAACAGCAGAGATGGCAGGAGCTATAGTACGAACTTAGCCTTCACCCCTCCAGAGTACTTGAGGACAGGAAGAATCACCCCAGAAAGTGTAATATACAGTTTTGGTACCCTTTTGCTTGATCTTCTCAGTGGCAAACATATCCCACCCAGTCATGCACTTGATCTTATACGaggcaaaaattttttgatgCTCATGGACTCGTGTTTGGAAGGCCATTTTTCAAATGATGATGGAACTGAATTAGTGAGATTAGCCTCACGTTGTTTACAGTATGAACCTCGTGAAAGGCCAAATGCCAAGTCACTCGTGACTGCTTTAAGTCCTCTTCAGAAAGAAACTTCGGTACCGTCAAATGTTTTGATGGGCATACCAGATGGGAGTGCGTCAACAAAGGAAACAGTTTCATTGACACCTTTTGGTGATGCTTGTTCTAGAAGAGACTTCACTGCAatacatgaaattttggaaaagGTTGGGTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACAAATCAAATACAAGACACACTAAATTCGAAGAAGCAAGGAGATTCTGCTTTTCGTGCTAAAGACTTCTCGACAGCCATTGACTGCTATACACAATTCATTGATGGAGGGACCATGGTATCGCCCACGGTGTATGCCCGGCGCTGCTTATGTTACTTGATGAATGACATGCCGCAAGAAGCTCTCGGAGATGCCATGCAGGCCCAATCAGTATGTCCCACGTGGCACACTGCCTTCTATCTTCAAGCGGCTTCCCTGTTCACTCTTGGGATGGACAATGATGCACTGGAAAGTCTTAAAGATGGCACCATGCTGGAAACCAGAAAGCATAGAAATTGA 1491 0.4346 MGARCSKFSLCWWSSSIKSNLQDLSDNDDGNQNEKLGFTEYSMDQLRSATSGFSPDNIVSEHGEKAPNVVYKGKLEEDRWIAVKRFNKSAWPDSRQFLVREEARAVGQLRNERLANLMGCCCEGEERLLVAEFMPNETLSKHLFHCRTALLGETQPMKWGMRLRVAFYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALSPLQKETSVPSNVLMGIPDGSASTKETVSLTPFGDACSRRDFTAIHEILEKVGYKDDEDVANELSFQMWTNQIQDTLNSKKQGDSAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMPQEALGDAMQAQSVCPTWHTAFYLQAASLFTLGMDNDALESLKDGTMLETRKHRN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0116 496 ProSiteProfiles Protein kinase domain profile. 56 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0116 496 Gene3D Transferase(Phosphotransferase) domain 1 135 333 - -
Sto12g0116 496 SUPERFAMILY Protein kinase-like (PK-like) 32 320 IPR011009 -
Sto12g0116 496 Gene3D Phosphorylase Kinase; domain 1 27 133 - -
Sto12g0116 496 Gene3D Tetratricopeptide repeat domain 390 495 IPR011990 GO:0005515
Sto12g0116 496 SUPERFAMILY TPR-like 392 485 IPR011990 GO:0005515
Sto12g0116 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 496 IPR045845 GO:0004672|GO:0009742
Sto12g0116 496 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 496 - -
Sto12g0116 496 Pfam Protein tyrosine and serine/threonine kinase 69 315 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0116 Sto-Chr12 772040 775445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0116 20 362 Glycoside Hydrolase AT3G07070 31.436 3.34e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto12g0116 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0116 - - gmx:732542 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0116 12 772040 775445 Sto12g0116 12 772040 775445 ECH