Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0109 ATGGCTTCCATTGCCCTCACCACTTCCTCTCCCACCCTTCCCTCTCTCCGATTTCGTTCCTCCTACCTCTCCCCCTCTAAATCTTCACACCTCTCTTGTTCCTTGCATCCCACCAACTTCAAAGCCCTCAACCATAACGCTTCCTTTTCCTCTATTCCATCCTTCACTCTCCCCAATCTTCCTTTCAATGTCAAACCCAATTTGAGTTACCCTCGTGTTCAAGCCTCTGCTGCTGGGGCTTCTATCACTCCTGCTCCGCCTCCCGCGCCTCAACCATGGAAGGGCGCTGCCATCAAACCTTTATTAGCTTCTATAGCGACGGGGGTTTTAGTCTGGTTCGCTCCTCTGCCTGCTGGAGTCTCCAAAAATGCGTGGCAACTGCTCGCCATATTCTTAGGCACCATTGTCGGCATCATTTCTCAGCCATTGCCTTTGGGAGCTGTGGCTTTGCTGGGTTTGGGCGTTTCCGTCCTCACCAAAACGCTTACTTTTGCTGCAGCATTTTCAGGCTTTGGCGATCCCATCCCCTGGCTCATTTGCCTGGCCTTCTTCTTTGCCAGAGGGTTCATTAAGACAGGCCTCGGCAATCGGATCGCTTATCAATTTGTATCTCTTTTTGGTAGCTCTTCCTTAGGGTTAGGATATAGTTTAGTTTTTAGCGAGGCCTTGTTGGCACCCGCCATTCCTTCGGTTTCAGCTAGAGCAGGTGGAATTTTTCTCCCATTGGTGAAGTCTCTATGCGTAGCTTGTGGTAGTAACGCGGGCGATGGAACTGAGAATAGACTTGGGTCATGGTTAATGCTGACCTGCTTTCAAACTTCGGTGATTTCATCCGCAATGTTTTTGACTGCAATGGCAGCCAATCCCCTATGTGTCACTCTCACTGCCAACTCCATCAACCAGACTATTGGGTGGTTGGACTGGGCCAAAGCTGCGATTGTCCCTGGTTTGGTGTCATTGGTACTGGTGCCGTtgattttgtatgtgatttatcCACCAACAGTGAAAGCCAGCCCAGATGCGCCCAAGCTTGCTAGGGAGAAGTTGAAGCAGATGGGATCAATGACTACAAATGAGAAGACAATGGCTGTGACTCTGCTTCTTACGGTGGGGCTCTGGATTTTTGGAGGGGCTCTCAAGGTGGATGCTGTATCTGCTGCCATTCTTGGGTTATCTGTACTTCTTGTCACAGGAGTTGTTACATGGAAGGAGTGTTTGGCTGAAGGAGTTGCCTGGGATACCCTCACGTGGTTTGCTGCTCTCATTGCAATGGCTGGGTATCTGAACAAATACGATCTCATTTCCTGGTTCAGTCAAACTGTGGTCAAGTTTGTCGGCGGATTGGGTCTCTCTTGGCAGATGTCTTTTGGCATTCTGGTCCTTCTGTACTTCTACTCACATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACAGCCTTCTTGTCTGTTGCTACTGCTCTGGGCACTCCGCCATACTTTGGAGCCATGGTGCTGTCCTTCCTCTCCAACATCATGGGTGGCCTTACTCACTATGGGATTGGTTCAGCACCTGTATTTTATGGTGCCAACTATGTTCCCCTTGCCAAATGGTGGGGCTATGGGTTCCTTATAAGTATTGTTAACATTATTATCTGGCTTGGAGTTGGAGGTGTTTGGTGGAAGGCCATTGGCTTGTGGTAA 1692 0.4888 MASIALTTSSPTLPSLRFRSSYLSPSKSSHLSCSLHPTNFKALNHNASFSSIPSFTLPNLPFNVKPNLSYPRVQASAAGASITPAPPPAPQPWKGAAIKPLLASIATGVLVWFAPLPAGVSKNAWQLLAIFLGTIVGIISQPLPLGAVALLGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCVTLTANSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTVKASPDAPKLAREKLKQMGSMTTNEKTMAVTLLLTVGLWIFGGALKVDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYDLISWFSQTVVKFVGGLGLSWQMSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAMVLSFLSNIMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIIIWLGVGGVWWKAIGLW 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0109 563 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 115 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
Sto12g0109 563 CDD ArsB_NhaD_permease 135 557 - -
Sto12g0109 563 Pfam Sodium:sulfate symporter transmembrane region 100 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
Sto12g0109 563 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 39 563 IPR030676 -
Sto12g0109 563 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 39 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0109 Sto-Chr12 735031 739145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0109 1 562 Antiporters AT5G12860 77.641 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0109 - - gmx:100793559 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0109 12 735031 739145 Sto12g0109 12 735031 739145 ECH