Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0105 ATGGACAAACAAGAAGACATCTTCAAGGCTCTCATGCAAGATTTAGGAAAACATCATCTCGAGTCTTTCAGAGACGAGGTAGGAACGCTGATAAAGTCCTTAAATTTCGCATTGAAGAATTTGAAACAGTGGATGTCTGCTAAAAAGGCTAAATTGCCACAAATTGCACTACTTACAAGTGCAGAAATTGTTCCGGAGCCTTTGGGTCTGGTCCTCATAATCTCATCTTGGAATTTCCCCATTGGACTGTCCTTGGAGCCTCTAATAGGAGCAGTAGCTGCTGGAAACACAGTAGTACTAAAGCCTTCAGAGATATCTAGTGCAAGTGCTTGTCTACTAGCCTCTACTCTCTGTAATTACTTAGACAACAAAGCCATCAAGGTTATCCAAGGGGATCCAGAAGTTGCTCAGCAACTACTCCTCCAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCACGTGTGGCACGAATTGTGATGTCTGAAGCTGCAAAACATCTGACGCCTGTGACTTTAGAGTTAGGGGGAAAATCCCCTGCAGTAGTTGATTCCCTTTCCTCTTCCTGGGACATACAGGTGGCTGTAAAAAGAATTATTGTGGGAAAATTCGGGACGTGTGCTGGTCAAGCATGCATAGCAATCGATTATGTCCTTGCAGAAAAGGAATTTACTTCCACATTGGTGGAATTGATGAAGGTGTGGATCACGAAAATGTTTGGAGAAAATCCAAAAGAATCCCACACTATTGCCAGGATTGTAAATAAACATCACTTCTTTAGACTCAAGAATCTTCTTTCCGATCCAAGGGTGAAACAGTCTGTAATTTATGGAGGCTCAATGGACGAAGAAAACTTATTCATTGAACCAACAATCTTGATGAATCCGCCAGTAGAGTCAGCAATCATGGCAGAAGAAATCTTTGGCCCACTGCTTCCAATAATTACTGTGGAGAAGATAGAGGATAGTATCAAATTCATAAACTCAAGGCCTAAGCCGCTAGCACTCTATGTGTTCACCAAAAACCCAACACTTGAGAGAAGAATAATGTTGGAAACATCGTCTGGAAGTGTGACATTCAACGATGCAATTCTACAGCGTGCCGTTTGGAGGAGTTGGAGAAAGTGGGTTTGgtatCCTCCATGGACTTTTAAGAAGTTTCAAGAACTTGAACAGGCTTACAACTATGACATTCTCGGATTACTCCTTGTCTTGTTGGGCTTAAAGAAATCATCAACACGTGTTTGA 1245 0.4177 MDKQEDIFKALMQDLGKHHLESFRDEVGTLIKSLNFALKNLKQWMSAKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPIGLSLEPLIGAVAAGNTVVLKPSEISSASACLLASTLCNYLDNKAIKVIQGDPEVAQQLLLQRWDKIFFTGSARVARIVMSEAAKHLTPVTLELGGKSPAVVDSLSSSWDIQVAVKRIIVGKFGTCAGQACIAIDYVLAEKEFTSTLVELMKVWITKMFGENPKESHTIARIVNKHHFFRLKNLLSDPRVKQSVIYGGSMDEENLFIEPTILMNPPVESAIMAEEIFGPLLPIITVEKIEDSIKFINSRPKPLALYVFTKNPTLERRIMLETSSGSVTFNDAILQRAVWRSWRKWVWYPPWTFKKFQELEQAYNYDILGLLLVLLGLKKSSTRV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0105 414 PANTHER ALDEHYDE DEHYDROGENASE 375 411 IPR012394 GO:0006081
Sto12g0105 414 PANTHER ALDEHYDE DEHYDROGENASE 2 366 IPR012394 GO:0006081
Sto12g0105 414 PANTHER ALDEHYDE DEHYDROGENASE 375 411 - -
Sto12g0105 414 PANTHER ALDEHYDE DEHYDROGENASE 2 366 - -
Sto12g0105 414 Pfam Aldehyde dehydrogenase family 3 364 IPR015590 GO:0016491
Sto12g0105 414 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 172 179 IPR029510 GO:0016491
Sto12g0105 414 PIRSF ALDH 1 370 IPR012394 GO:0006081
Sto12g0105 414 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 176 366 IPR016163 GO:0016620
Sto12g0105 414 SUPERFAMILY ALDH-like 3 369 IPR016161 GO:0016491
Sto12g0105 414 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 175 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0105 Sto-Chr12 712146 714383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0105 2 409 Aldehyde Dehydrogenase Gene Family AT4G36250 50.226 4.49e-157 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0105 K00128 - gmx:100817701 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0105 12 712146 714383 Sto12g0105 12 712146 714383 ECH