Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0098 ATGGACCATGACAAGACTGGATGTCAAGCTCCCCCAGAAGGTCCCATATTGTGCATCAATAACTGTGGATTTTTTGGAAGTGCTGCCACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAGGAGGAGCAGGCCAAGCTTGCAGCATCGTCCATTGGGAATATTATGAATGGATCCTCAAGCAGCAGTGGAAATGAACCTGTTGTTTCTGCAAATGTGAATATCCCAGTCAATTCAGTAGAGCCTAAAACTATATCTGCACAATCTTTTCTTGCTTCAGGCTCAAAGGAGAGTGGTGAGGCAAAGCCGAAGGATGGTCCCAAACGGTGCAGCAGCTGCAACAAGCGTGTTGGTTTGACAGGGTTCAATTGCCGATGTGACAAGCATGATTGCCCCTTTGATTACCGCACTGCTGCACAGGATGCCATAACTAAAGCAAACCCAGTTGTTAAGGCTGAGAAGCTTGATAAGATCTAG 486 0.463 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKEEQAKLAASSIGNIMNGSSSSSGNEPVVSANVNIPVNSVEPKTISAQSFLASGSKESGEAKPKDGPKRCSSCNKRVGLTGFNCRCDKHDCPFDYRTAAQDAITKANPVVKAEKLDKI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0098 161 SMART AN1_Zf_4 113 139 IPR000058 GO:0008270
Sto12g0098 161 Gene3D - 88 157 IPR035896 -
Sto12g0098 161 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Sto12g0098 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Sto12g0098 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 161 - -
Sto12g0098 161 SUPERFAMILY AN1-like Zinc finger 98 156 IPR035896 -
Sto12g0098 161 MobiDBLite consensus disorder prediction 91 113 - -
Sto12g0098 161 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 161 - -
Sto12g0098 161 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Sto12g0098 161 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Sto12g0098 161 Gene3D - 4 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0098 Sto-Chr12 653344 653862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0098 8 161 C2H2 Transcription Factor Family AT3G52800 38.182 1.24e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0098 - - gmx:100802969 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0098 12 653344 653862 Sto12g0098 12 653344 653862 ECH