Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0095 ATGTGTGGGAGCGTCTTCCCTGTTTTCCTTGGGAGAGACATGGAAGCCTGGGCGGAGCTGCAGCTGAAGAACCTTAGAGTAATCAAAGTCCTCGGAAAAGGCGGCATGGGAACCGTCTTGCTGGTCCACGACACTTGCTCCGATCCCTCCGCTCAGTCCCCTTTCGCACTCAAGGTCCTCCACAAATCCTCCATTAATTCCGTGGACGCCGAGCGCCGTGCTCGCTGGGAAATCCACGTCCTCACACGCTTGTCCCACCCATTCCTGCCTTCCCTTATGGGCAGCATTGAGACGGATCAATTCCTGGGTTGGGCTGTTCCTTATTGCCCAGGTGGCGACCTCAACGTCCTCCTTCACCGCCAATTCGATCGTGTCTTCTCTCCCACCGTTATTCGCTTCTATTTGGCCGAAATCCTCTGTGCTCTCCAGCATCTCCACAGCATTGGCATCGCCTACCGCGATTTGAAGCCAGAGAACGTCCTCATTCAGCAATCTGGCCACCTCACTCTCACCGACTTCGATCTCTCTCATAAGCTCACTCCCAAAACCATCACAACTGTCATTTCAACAACACTGCCCACCCAGGAAAATCTCCCCCACGCCCGCCGGAATTTCATACGATGGTTCCCCGACAATAAAAAACGGCTCAAGAAGGCCAAATCGGCCCGGGTCAGCCCTGTGAGTCGACGCAAACCGAGTTTCTCAAATGGTGACAAGTCTAATTCGTTTGTTGGCACGGAGGAGTACGTGTCGCCGGAGGTAGTCCGCGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCCTGGGAGTGTTGGCATATGAAATGTTATATGGGAAGACGCCGTTCAAGGGGAATAACCGCAAGGAAACGTTTCGAAATGTTTTGGTAAAATCGCCGGAATTCATAGGCAAGCGGACGGTGCTAACGGACTTGATCGAGCGGTTGCTGGAGAAGGACCCCACAAAGCGTTTGGGTTACGCGCGAGGCGCGTGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTCAGGTGGGACCTGCTGACGGAGGTAGTACGTCCGCCGTTCATTCCGCCGACAGATAAGGGCGATTTCACGGCCGGCGGGATGGACTTAAGTGATTATTTCCGGAGCTTGAAATCGCCGCCGTCCTTCCCTCCTTCGCCGTCTTCTGAGTATCAGAGGAATATTTCCATAACACTAGAAGACCGGGCATAG 1218 0.5452 MCGSVFPVFLGRDMEAWAELQLKNLRVIKVLGKGGMGTVLLVHDTCSDPSAQSPFALKVLHKSSINSVDAERRARWEIHVLTRLSHPFLPSLMGSIETDQFLGWAVPYCPGGDLNVLLHRQFDRVFSPTVIRFYLAEILCALQHLHSIGIAYRDLKPENVLIQQSGHLTLTDFDLSHKLTPKTITTVISTTLPTQENLPHARRNFIRWFPDNKKRLKKAKSARVSPVSRRKPSFSNGDKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGVLAYEMLYGKTPFKGNNRKETFRNVLVKSPEFIGKRTVLTDLIERLLEKDPTKRLGYARGACEIKEHEFFRGVRWDLLTEVVRPPFIPPTDKGDFTAGGMDLSDYFRSLKSPPSFPPSPSSEYQRNISITLEDRA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0095 405 ProSiteProfiles Protein kinase domain profile. 25 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0095 405 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Sto12g0095 405 PANTHER FLIPPASE KINASE 1-RELATED 20 383 - -
Sto12g0095 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Sto12g0095 405 Pfam Protein kinase domain 27 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0095 405 Pfam Protein kinase domain 235 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0095 405 SMART serkin_6 25 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0095 405 SUPERFAMILY Protein kinase-like (PK-like) 22 395 IPR011009 -
Sto12g0095 405 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 20 383 - -
Sto12g0095 405 Gene3D Transferase(Phosphotransferase) domain 1 237 358 - -
Sto12g0095 405 Gene3D Phosphorylase Kinase; domain 1 23 112 - -
Sto12g0095 405 Gene3D Transferase(Phosphotransferase) domain 1 113 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0095 Sto-Chr12 634923 636221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0095 20 389 AGC Kinase Gene Family AT3G20830 61.579 1.46e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto12g0095 Pkinase 3.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0095 - K08286 twl:119997765 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0095 12 634923 636221 Sto12g0095 12 634923 636221 ECH