Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0086 ATGTCTGCAAGATCTTTGTTTCGCGCATGTTTCACTGCGCCTTCTATGTTCAAGTTTACAGCTATATCTCACTCTGCCTTTCCTTTTACAGGAAGTGGTACATACAGTGCATCAACTTCATTGAAACTACTCTTCAACAACAACCATATATACTGCCTACTTCTTAAAGGTCAGGAAGTCGAATATTCAGAGAGGATGGATGTGGAAAGATCGATAGAGGACCAATTCTCCAAGCTGCATCCATGCTTGCCAGTAAACACCCGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTGTCAGCTGCTTATGCACTATGCAGGCTTGGTTATAAAGAAGTCACTGTGTTGGAGAAGCATCATACAGTGGGTGGCATGTGTGAATCCGTAGAAATTGAAGGGAAAGTTTATGATCTGGGGGGACAAGTTCTTGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGGGTCTGCTCTAGAAGAAATGGACTCTCACAAGCTTGCAGTTATTGATCGTTCTACTGGAAAATATCAAGATATTAAAGTTGCAGATGATTACGTATCTGTCATGTCACTAACATTGGAAATCCAAGAAAAGGTAAAGAATTCTGATCGTATTGGAGTCCATGCTGTCAGCCAGCTTGCTTCAGACTTGACTCCACAATATCTTGAGGGGCATGGACTCAAATCTGTCCCTAAATCCGTGGCCTACGGCTACACTGCTTCAGGTTATGGTTTTGTTCAAGATATGCCTTATGCCTACCTTCATGAATTTACCAGAACGTCAATGGCTGGAAAAATTAGACGTTTTAAAGGTGGATATACAAGTCTTTGGCAGAAAATTGCAGAATCACTTCCACTCAAACTTCACTGCAACACTCAAGTGTTGGCAGTCAGACGCAACTCTGATGGTGTCACTGTTAATGTCAAGAATTTTGATCAAGTTAAAACAATGGAGTTTGATAAGATTATAATCTCTGGAAACTTTCCATTAAAATATGGAACAACTTACAGATCACTGCCCTCAACTTGCACAGAACATGAAACGGAAGTGATGGATGCAAGTGATCTTGAAAGAGATTTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACGGTTTTGAAGGTTAAGGGGCTAGAAGATATGCCCAttggattttattattttaatgaatTTATGGAAGATCCCAGCACAATTGGAAATCCAGTAGCCATACAGAAATTCTATGCTGACACTAACATATTCTTGCTCTGGTCCTATGGCAATTCTGTTGACATTATGGGACCAACTGTCACTGAGCTTGCAATCAGTGCAATAGAGGCCATTGGGGGACAAGTTGAGAATATCATTCTTCAACGTCATATGAAAGATGGATTCTATGATAAATTGGAATTAGAACTTCAAGGTTCAAGGAATACTTACTATGTAGGCGGACTTATGGCATTTGAGCTTACAGAGAGAAATTCGTCTTACGCCATGGCTTTAATTTGCAAGAACTTTGCAAATAGCAACGATTTACCAATGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACGGAGAGCCTAAAAGAGGACCCTAAGGAGTTAGGCGAACTGCCAGGGGTGCAATTTCCTGACTTACCTACTTTAAATGGCTATTTGAAGTATTGGGGAACTCATCCAATCACTCAAAACAAAACTCTCTATACTTGGATAAATGAAGAAGGGGCAATAATTGGCCAAAGGACCTACACAGAACTTCATTCAAATGCCTCTTGCATTGCTCAAAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAACCTGGAGACAAGGTTCTAATGGTCTATGTCCCTGGTCTTGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCCAAAGTCATACCAGTCCCTGTTCTTCCCCCTGACCCCATGCAAAGAGGTGGACAAGCACTTGTGAAGATTGAAAATATTGCTAAATCATGTGGCATTGTAGCAATTTTGTCAACAACAGCTTATCACTCAGCAGTCCGTGCAGGTCTAGTGAAAAATTTAATCTCATTAAGCAGAAAAAATGGCAAGTCTTCAGCTCGGTGGCCTGATCTTCCATGGCTTCACACTGAGGCTTGGGTCAAGAACTCGAAGAATTCGAATATGGGATGTTTAGTTGATCAATGTGAATCTCAGTCTAGTGATATCTGTTTTCTGCAATTTACCTCAGGTTCGACGGGTGATGCTAAAGGAGTAATGATAACTCATGGTGGGCTTGTTCATAATGTGAAGTTAATGCGGAGACGATACAAAAGCACCTCAAGGACAGTACTTATAAGCTGGCTTCCTCAATATCATGACATGGGGTTGATTGGAGGACTTTTTACATCTCTTGTTAGCGGTGGTACAGCAATTCTATTTTCTCCGATAACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATTAGCAAGTATCGAGGAACTCATAGTGCTGGCCCTAACTTCGCTTTCGAGTTAGTGATTCGAAGACTTGACTCAGACAAGGATAAGCTTCACAGTTTAGACCTCTCATCCATGACTTTTCTCATGGTTGCAGCTGAACCAGTGAGAGAAAAGACTTTGAAAAGATTTATTGAGCTAACCAGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCCGGATATGGCTTGGCTGAAAATTGTGTGTTTGTTAGTTGTGCATTTGGAGAAGGTCACCCCATTTTTGTTGATTGGCAAGGCAGAGTTTGTTGCGGATATGTTCAACCAGGGGATGCAGATGTTGACATTAGAATAGTTGATCCAGAAAGTGGTGATGAGCTTCAAGAAGATGGAAAGGAAGGGGAAATATGGATTAGTAGTCCAAGTGCAGGAATAGGATATTGGGGAAGGGAAGAACTCAGTcaaaaaacttacaaaaataagCTCCAGAATTGCCCCGGACGTAACTACACGAGAACTGGAGACTTGGGACGAATAATATATGGAAAGCTGTTCATCACCGGGAGAATCAAGGACCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCGGATGTTGAGAAAACAGTTGAGAGCTCATCAGAGTTACTTCGTCCAGGGTGTTGTGCTGTCATTGGGGTTCCTGAGGAAATTCTGTCAACAAAAGGTATTTCCATTCCTGATGGTTCTGACCAAGTTGGCCTTGTTGTGATTGCAGAAGTAAGGGATGGTAAAGCAGTTGGTAAAGATGTGATCCAACAAATTCAAACTCGAGTGGCAGAAGAACATGGAGTCAATGTTGCTTCTGTTAAGTTGGTGAAGCCTAGAACCATCAGCAAAACAACCTCAGGAAAGATCAAGAGATTTGAATGCCTGAAACAGTTCACAGATGGAACATTGAACTTGGCACCACAACCTATTTCGACAAAGAAAATAGTATCACGCTCATTTTCGACAGGAACATTGGGAGGACATACACCTCGATCTCGTATACCTCCAACTGGTCCAAGAATCACTAACCAGGaaattatggaattcctgaaaGGGCTAATTTCTGAGCAAACCGGTATCCCTGCCAACAAAATCTCAGTCACGGACAACCTGACCTCCTACGGACTGGACTCAATAGGTGTCGTTAAAGCAACTCAAAAGCTCTCCGATTTCCTAGGAATGCCAGTTGCTGCCATAGATGTCTTCACTGCATCTTGTATTCAAGAGTTAGCTAACTTCTCAGAGAACCTTATATTGAAGTCTCAACCTCAACATGAGAGCAATCCTTCCCATGCTACAGAACTTGAGATTGATTCTACTGAATTGGTTATGGATGTAACAAAGTCTCGCCAATTTGGTATCCGTTTCCTTCAGCTCTTAGCTCTTCTTTATATGTCCATCATGCTAGTTTTTCCTGCTTATCTATCCACCGTTGCTTTTCTGGGTTTTATCCCAGGTGCCAATGAATCATTAGATGGGATCACTTGGTCAAACTATTTGATTTCCTTGTCTTTGGCACCTCTTGCTTGGATCCTTTGCATTGTGTCTACTTGTATTTGCATTTCATTATTCGGAACTTCTTTTTTGAGGCCAAATTATACTCTTACCCCTGAGATTTCCATATATTCTATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAATCCAAGAAATTTCTTCTAAAGTTCTGGCAGTACACCTCAGAGGAACAGTGTTCTTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGGTCCTCGGTGTTGCTGGATACAATTGACATCACTGACCCATCTCTAGTTTCAATTGGAGACGAAGTTGTCATTGCAGAAGGAGTTTTAATTCAAAGCCACGAGGTAAAGAATGGATTGGTAAGCTTCCTCCCTATTAGGATCGGCAAAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTATTATTAGAGAAGGCACTGAGGTGCAGCCTTTGCAAAAGGTTGAAGCAGGCAAGCATGCGCTCAAAGCTACGAAGCTTAACAATGTCGATAAGATTGCAGTGTTGCCCGTTGAAACTAACAAAGCtcaatatgatattatataCCAATTTATGGGGATCTATCTAGTTGGCTTTCTTAATTCCCTTGCTGCAGCTACCGTCTACTTCCTATACATATGGTTCTTTCAGAAAGCGCCATCACTTCAACACTTGTCATTTGTTTGTTTATCTGGGGCCTTCCATTGGATTCCGTTTACCGTCGTTGCATATGTTACCATGTTTTCTTATGTCCCATCAAATCCCGTCACCTTTGCCATTTCATTATCTAGTGCCTACTTGCTTCATGGTCTTATACTCAGCTCTCTCACTTGCCTTTTGACTCGTCTCCTGACATCAAGTCAAAAGCAAacccaatttaaaacttggctTCAACAgcaaatcatcattgcctgtcacCTTAGATTTGCAAAGCTTTTAACAGGAACAGAAGCCTTCTGCATATATTTACGCTTTTTGGGTGCAAAAATTGGAAAACATTGTTCCATTAGAGCGATCAACCCAGTTTCAAACCCAGAATTATTGTCAATTGGTGCAGGTGTCCATCTTGGAGATTTTAGCCGGATAGTGACTGGGTTCCATTCTTGCAATGGCCATGTCAGTGGAAAAGTTAAGATTGAGGATAACTCAGTAGTTGGGAGTCAAAGCCTAATCCTCCCTGGATCTACTATTCAAAAGAATGTCATTATAGGTGCACTTTCGGTTGCTCCAATCAATTCTACACTCCAAGAGGGTGGTGTGTACATTGGATCTCAAACTCAAGTTGCTATCAGAAACTCTGAAAATGTTTTAGATGAACGGATAGAGGAAATGGACTTGGAGTACAAGAAAATAGTATCTAATCTAAGTGCAAATTTGGCTATCACAACTATGAATGCTAAAGCAAGATATTTTCATCGCATTGGTGTTAGCGGAAAGGGGCACTTGAAAATATATGACAAGATTGAGGGTTTTCCTTTGCACAAGATTTTTCACCCAGGAAAGAGCTACCCTGTCATTGTTAGGCATAGCAATAGTTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCATCCTTGAAGATTTTCTCTGATGAACCTGCTTCTTCTCATCGTCCTCTTTATGACTTAACACTGAAAACAGGGAATGCATTCTATGCTCGCACCATCTCCGATTTTGCCACTTGGCTTGTTTGTGGGCTTGCTGCAAGGGAGGAGTTCGTCAAGCGATTCCCACATGTTCGTGATGCAGTATGGAATTCTCTTCGACATGCTGACTCCTACACCAAAATGCATTACTACTCAAACTTTTGCAGGCTAATCCGCTTTGAAGATGGACAGCAAAGGTATATCAAACTCAAGTTACGACCTTATGACACAAGTATTAGCGAGGATTCAGGTAAGGTGGAGCCAATTGGAATCCTTCCACCAGAGACAGGTGCAATTCCTAGGGATGAAAATGATAAACGCCCTTTGCTTTTCTTGGCTGACGATTTTCAACAGCGTGTGAATTCTCCAGGTGGGGTTCGCTATGTTCTCCAGTTGCAACTGCGAGCAGTACCAGATGATGAAGCCACCCGTGACATTTTAGTGGATTGCACTAAACCATGGGACGCCAATGAGTTCCCATACATTGATGTTGGAGAGATTAACATCAATCAAATACTTGCTGCAGAAGAATCAGAGAGACTGGACTTCAATCCCTACCTCCGGAGCCATGAACTTGATGTCATCCATGCTACTTCCAAGTCCCAAAGTGCTTCAATTGATCATGGTCGTTCACTGATCTATGAGATTagtcaaaaaataagaaataaagaGCCACTCCCTGAGGCCTTAAGGAATTTTATAGAGCAATCCGATGTGAAGGTAGACTTGTCAAGTTGTCCAATGGCAGCATCATTGCCTAAAAAGGAGTCTCAAGAAGTGACCTTGACCAGAACATGGTATCAAACCTTTTCAGCCATTTTCACTCAGCCGTTGATGCAGACACTTTTACCTTATGTGGTGGTCGGTTTAGCAATTTTCGCTCCTTTGAATTGGGTTGTTCACCAAAAGAATGCCAACAAACTCCCACTCCATTGGTTGCTTCCTCTGTTTTGGATTTTCTCAGGTGCTCTAGCTGCATTGACGTGTGTCGTAGCTAAATACGTGCTTGTGGGAAGTAACAAAGTAGGTGAAACTGTGGCTATATGGAGTCAAAGGGTCACCATGGATAGTACATGGCAAGCCATTAGAAGTGTGGTTGGAGATTATTTCATGGAGATGACAAGTGGGTCATATTGGTTCGTGGTATGGATGAAGCTGATGGGTGCAGATGTAGACATGGAGCGTGACGCTTACGTGGACAGTGTGGGAGTATTATTGAACCCGGAAATGGTGAGGATTGGGAAAGGGGGTTGTGTGGGAAGAGAGGCCTTGTTCTTCGGACATATAtatgaaggagaaggaggaatGGTCAAGTTTGGAGAGATCACAATTGGAGAAGACGGGTTTGTGGGAAGTAGAGCTGTTCTGATGCCAGGTGTGCAAGTGGAGGGTGAGGGTAGTCTTAGTGCTCTATCTCTTGCTATGAAAGAAGAAATAGTTAGgtctatataa 7104 0.4122 MSARSLFRACFTAPSMFKFTAISHSAFPFTGSGTYSASTSLKLLFNNNHIYCLLLKGQEVEYSERMDVERSIEDQFSKLHPCLPVNTRIGIVGAGPSGLSAAYALCRLGYKEVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEEMDSHKLAVIDRSTGKYQDIKVADDYVSVMSLTLEIQEKVKNSDRIGVHAVSQLASDLTPQYLEGHGLKSVPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPLKLHCNTQVLAVRRNSDGVTVNVKNFDQVKTMEFDKIIISGNFPLKYGTTYRSLPSTCTEHETEVMDASDLERDLFSKVETNDYYTTVLKVKGLEDMPIGFYYFNEFMEDPSTIGNPVAIQKFYADTNIFLLWSYGNSVDIMGPTVTELAISAIEAIGGQVENIILQRHMKDGFYDKLELELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSNDLPMFPYTKSLFPLQTESLKEDPKELGELPGVQFPDLPTLNGYLKYWGTHPITQNKTLYTWINEEGAIIGQRTYTELHSNASCIAQKLLTSQKPVIKPGDKVLMVYVPGLDFIDAFFGCLRAKVIPVPVLPPDPMQRGGQALVKIENIAKSCGIVAILSTTAYHSAVRAGLVKNLISLSRKNGKSSARWPDLPWLHTEAWVKNSKNSNMGCLVDQCESQSSDICFLQFTSGSTGDAKGVMITHGGLVHNVKLMRRRYKSTSRTVLISWLPQYHDMGLIGGLFTSLVSGGTAILFSPITFIKKPLLWLETISKYRGTHSAGPNFAFELVIRRLDSDKDKLHSLDLSSMTFLMVAAEPVREKTLKRFIELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGHPIFVDWQGRVCCGYVQPGDADVDIRIVDPESGDELQEDGKEGEIWISSPSAGIGYWGREELSQKTYKNKLQNCPGRNYTRTGDLGRIIYGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSELLRPGCCAVIGVPEEILSTKGISIPDGSDQVGLVVIAEVRDGKAVGKDVIQQIQTRVAEEHGVNVASVKLVKPRTISKTTSGKIKRFECLKQFTDGTLNLAPQPISTKKIVSRSFSTGTLGGHTPRSRIPPTGPRITNQEIMEFLKGLISEQTGIPANKISVTDNLTSYGLDSIGVVKATQKLSDFLGMPVAAIDVFTASCIQELANFSENLILKSQPQHESNPSHATELEIDSTELVMDVTKSRQFGIRFLQLLALLYMSIMLVFPAYLSTVAFLGFIPGANESLDGITWSNYLISLSLAPLAWILCIVSTCICISLFGTSFLRPNYTLTPEISIYSMDFVKWWALYKIQEISSKVLAVHLRGTVFLKYWFEMLGARIGSSVLLDTIDITDPSLVSIGDEVVIAEGVLIQSHEVKNGLVSFLPIRIGKNSSIGPYAVIQKGSIIREGTEVQPLQKVEAGKHALKATKLNNVDKIAVLPVETNKAQYDIIYQFMGIYLVGFLNSLAAATVYFLYIWFFQKAPSLQHLSFVCLSGAFHWIPFTVVAYVTMFSYVPSNPVTFAISLSSAYLLHGLILSSLTCLLTRLLTSSQKQTQFKTWLQQQIIIACHLRFAKLLTGTEAFCIYLRFLGAKIGKHCSIRAINPVSNPELLSIGAGVHLGDFSRIVTGFHSCNGHVSGKVKIEDNSVVGSQSLILPGSTIQKNVIIGALSVAPINSTLQEGGVYIGSQTQVAIRNSENVLDERIEEMDLEYKKIVSNLSANLAITTMNAKARYFHRIGVSGKGHLKIYDKIEGFPLHKIFHPGKSYPVIVRHSNSLSADDDARIDARGASLKIFSDEPASSHRPLYDLTLKTGNAFYARTISDFATWLVCGLAAREEFVKRFPHVRDAVWNSLRHADSYTKMHYYSNFCRLIRFEDGQQRYIKLKLRPYDTSISEDSGKVEPIGILPPETGAIPRDENDKRPLLFLADDFQQRVNSPGGVRYVLQLQLRAVPDDEATRDILVDCTKPWDANEFPYIDVGEININQILAAEESERLDFNPYLRSHELDVIHATSKSQSASIDHGRSLIYEISQKIRNKEPLPEALRNFIEQSDVKVDLSSCPMAASLPKKESQEVTLTRTWYQTFSAIFTQPLMQTLLPYVVVGLAIFAPLNWVVHQKNANKLPLHWLLPLFWIFSGALAALTCVVAKYVLVGSNKVGETVAIWSQRVTMDSTWQAIRSVVGDYFMEMTSGSYWFVVWMKLMGADVDMERDAYVDSVGVLLNPEMVRIGKGGCVGREALFFGHIYEGEGGMVKFGEITIGEDGFVGSRAVLMPGVQVEGEGSLSALSLAMKEEIVRSI 2367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0086 2367 SUPERFAMILY FAD/NAD(P)-binding domain 86 336 IPR036188 -
Sto12g0086 2367 Pfam Flavin containing amine oxidoreductase 97 330 IPR002937 GO:0016491
Sto12g0086 2367 PRINTS Adrenodoxin reductase family signature 88 110 - -
Sto12g0086 2367 PRINTS Adrenodoxin reductase family signature 112 125 - -
Sto12g0086 2367 ProSitePatterns Putative AMP-binding domain signature. 734 745 IPR020845 -
Sto12g0086 2367 Gene3D - 1162 1243 IPR036736 -
Sto12g0086 2367 Gene3D - 368 458 - -
Sto12g0086 2367 PANTHER AMP-BINDING ENZYME 66 2366 - -
Sto12g0086 2367 Gene3D Hexapeptide repeat proteins 2235 2357 - -
Sto12g0086 2367 ProSitePatterns Phosphopantetheine attachment site. 1199 1214 IPR006162 -
Sto12g0086 2367 Gene3D Catalase core domain 1761 2114 - -
Sto12g0086 2367 Gene3D Hexapeptide repeat proteins 1617 1760 - -
Sto12g0086 2367 PANTHER AMINE OXIDASE 66 2366 - -
Sto12g0086 2367 Pfam Phosphopantetheine attachment site 1175 1239 IPR009081 -
Sto12g0086 2367 SUPERFAMILY Trimeric LpxA-like enzymes 2213 2356 IPR011004 -
Sto12g0086 2367 Gene3D - 159 267 - -
Sto12g0086 2367 Gene3D Hexapeptide repeat proteins 1406 1506 - -
Sto12g0086 2367 SUPERFAMILY ACP-like 1166 1244 IPR036736 -
Sto12g0086 2367 Gene3D - 1007 1135 IPR045851 -
Sto12g0086 2367 SUPERFAMILY Heme-dependent catalase-like 1774 2107 IPR020835 GO:0020037
Sto12g0086 2367 CDD FAAL 563 1126 IPR040097 GO:0008610
Sto12g0086 2367 Gene3D - 88 500 IPR036188 -
Sto12g0086 2367 SUPERFAMILY Acetyl-CoA synthetase-like 561 1129 - -
Sto12g0086 2367 SUPERFAMILY Trimeric LpxA-like enzymes 1394 1484 IPR011004 -
Sto12g0086 2367 SUPERFAMILY Trimeric LpxA-like enzymes 1657 1755 IPR011004 -
Sto12g0086 2367 Gene3D - 536 1006 IPR042099 -
Sto12g0086 2367 Pfam AMP-binding enzyme 579 1012 IPR000873 -
Sto12g0086 2367 ProSiteProfiles Carrier protein (CP) domain profile. 1170 1244 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0086 Sto-Chr12 569317 577725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0086 730 1045 Monolignol Biosynthesis Gene Families AT1G20480 27.129 4.56e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0086 - - cam:101501314 3584.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0086 12 569317 577725 Sto12g0086 12 569317 577725 ECH