Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0066 ATGGGAAGCTGCATATCCTCGCCGGGCAAAACATTCCCTCGCAAGAGGTCCAAACACACCATCAAGCCTTCCACCCCAAAATCTGCCTCCCCCCACGCGCCGCCGCCTTCCCAAAAATCCGCCCCCGTCAACGTCGTATCCAACCCCGCCCCCGGCAGCATCTTCGACAAGTACGAGTTAGGCAAGGAATTGGGACGCGGGGAGTTCGGCGTCACGTACCGATGCGTGGAAAAAGAGAGCGGACAGGCCTACGCGTGTAAGAAGATCTCCAAGACCAAGCTTCGTACTGAGATTGATATACAAGATGTGAGGAGAGAGGTTCAGATCATGAGGCATTTGCCTAAGCATCCTAATATCGTCAACTTCAAGGAGGCTTATGAGGACAAAGAAGCTGTTTATCTCGTCATGGAGCTCTGTGAAGGTGGCGAACTTTTTGACAGAATCGTCGCCAAAGGCCATTACACCGAACGTGCTGCCGCTAATGTTGTTAAGACCATTCTTCAGATTTGCAAGCCTGAAAATTTCCTATTTGCGGATACAAGCGAGAGTGCTCCAGTAAAGGCAATTGATTTTGGGCTTTCCACCTTCTATGAATCTGGACAGAGATTCAATGAAATTGTGGGAAGTCCCTATTACATGGCTCCAGAGGTGTTAAGACGTAACTATGGACCTGAAATTGATGTGTGGAGCGCAGgcgtaattctttatattttactttGCGGAGTTCCACCGTTTTGGGCAGAATCTGAGGAAGGAATAGCACAGGCCATCATCCGGGGAAACATAGACTTTGAAAGAGACCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAAGTCTAGTTAAAAGTATGCTTGATCCAAATCCATACAGCCGATTAACTGGTGAAGAAGTTCTTGAGCATCCGTGGATACAAAACAAGGACCAGGGTCCCAATATCTGTCTAGGAGACCATGTCAGAATGAGGATCAAGCAATTCTCCTTGATGAACAAGTTCAAGAAGAAAGTTCTTAGAGTGGTGGCGGATAACCTTCCAGATGAGCAAATAGATAGGATCAAGCAGATGTTCCACATGATGGACAAGGATAAAAATGGAAACTTATCATTTGAAGAACTCAGAGACGGGCTTTCTAGAATTGGACACACTCTTCCTGATCATGATGTGCAGATGTTACTGGAAGCAGCAGATATAGATGGAAACGGCACATTGAATTGTGAAGAGTTTATCACAATGAATGTTCATCTGGGAAAGATTGGGAGTGATGAGCATCTGTCTGAAGCCTTCAGTTACTTCGACAAGAACAAGAGTGGATATGTGGAGTTTGATGAGTTGAAAGATGCCTTGTTGGATGACAACTTAGGTCCCAGTAACGACCAGGTGATCCATGACATTCTATTTGAAGTCGACTTGGATaagGATGGTCGAATCAGTTTTGAGGAGTTCAAGGCGATGATGAAGACAGGACCAGACTGGAAAATGGCTTCTCGCCAGTATTCAAGAGCAATGCTGAATGCGTTGAGCTTCAAGATGTTCAACAACAAATCTGTCAAGTCTGCCTAA 1557 0.4534 MGSCISSPGKTFPRKRSKHTIKPSTPKSASPHAPPPSQKSAPVNVVSNPAPGSIFDKYELGKELGRGEFGVTYRCVEKESGQAYACKKISKTKLRTEIDIQDVRREVQIMRHLPKHPNIVNFKEAYEDKEAVYLVMELCEGGELFDRIVAKGHYTERAAANVVKTILQICKPENFLFADTSESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEEAKSLVKSMLDPNPYSRLTGEEVLEHPWIQNKDQGPNICLGDHVRMRIKQFSLMNKFKKKVLRVVADNLPDEQIDRIKQMFHMMDKDKNGNLSFEELRDGLSRIGHTLPDHDVQMLLEAADIDGNGTLNCEEFITMNVHLGKIGSDEHLSEAFSYFDKNKSGYVEFDELKDALLDDNLGPSNDQVIHDILFEVDLDKDGRISFEEFKAMMKTGPDWKMASRQYSRAMLNALSFKMFNNKSVKSA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0066 518 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Sto12g0066 518 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Sto12g0066 518 ProSiteProfiles Protein kinase domain profile. 58 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0066 518 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Sto12g0066 518 Pfam Protein kinase domain 58 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0066 518 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Sto12g0066 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 500 - -
Sto12g0066 518 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Sto12g0066 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 38 500 - -
Sto12g0066 518 Gene3D Transferase(Phosphotransferase) domain 1 144 312 - -
Sto12g0066 518 SUPERFAMILY Protein kinase-like (PK-like) 40 313 IPR011009 -
Sto12g0066 518 Gene3D - 313 486 - -
Sto12g0066 518 SUPERFAMILY EF-hand 332 498 IPR011992 -
Sto12g0066 518 MobiDBLite consensus disorder prediction 1 46 - -
Sto12g0066 518 Pfam EF-hand domain pair 421 485 IPR002048 GO:0005509
Sto12g0066 518 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Sto12g0066 518 Gene3D Phosphorylase Kinase; domain 1 60 143 - -
Sto12g0066 518 Pfam EF-hand domain pair 363 410 IPR002048 GO:0005509
Sto12g0066 518 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Sto12g0066 518 ProSiteProfiles EF-hand calcium-binding domain profile. 346 381 IPR002048 GO:0005509
Sto12g0066 518 SMART efh_1 350 378 IPR002048 GO:0005509
Sto12g0066 518 SMART efh_1 459 487 IPR002048 GO:0005509
Sto12g0066 518 SMART efh_1 386 414 IPR002048 GO:0005509
Sto12g0066 518 SMART efh_1 422 450 IPR002048 GO:0005509
Sto12g0066 518 CDD STKc_CAMK 57 302 - -
Sto12g0066 518 ProSitePatterns EF-hand calcium-binding domain. 359 371 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0066 Sto-Chr12 438731 440912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0066 1 510 EF-hand Containing Proteins AT2G31500 66.792 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto12g0066 Pkinase 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0066 K13412 - gmx:100801716 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0066 12 438731 440912 Sto12g0066 12 438731 440912 ECH