Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0062 ATGTATCCAAAACGATCTAGCAAGGGGGATGGTCCTGTTTCCAGGCCAGTGCGCACAAGTGATAGGATACGATCAAGGCCAAATGTGTATGGCCCACCGTACTTATGTTATAATGCAAATCTTAAGCACTCAAGGAGAAGCAAGAACAAGACAAGGATAGCTGCTGCTCAGATTGCCAAGATGTTGCATCCAAAGAAGCGGCCAGCATCAGACTCAAATACTAATTCTGCCTCGACCAACCTTCGACGTTCAACCAGAAAAAGAAAGCTTTCTATAAATCTTGAAGGTTTCACAGATAGTTCTGGATCTGAAGATGAAGATTTAATGAGACCCACACATCGTCCGTCTAGAAAACAGATTGACAATAGCATCAATCAAGATGAGTTGATTTCTTCCAATTGCAAAAGAACAATGAAGACTAAACCAACACCTAGACGCGAAGGTCTAAGACCACGCCATTTGAAGGCAGTTGCAAGAGAATTGAATTCAGAATCAGATGATGAGCAAGATCTTTCAAAAGAAAAGGCTGAACAAGATGAAacagaaaatgagaatgATGCAGATGATGATCAAAATGAGATTGAAGGGGATACTGAGGGTGAAGATGAAGACGAGGATGATGATGAGGGtgaggatgaagaagatgaagagggtgAAGAACAGGATGGGAAAAAGCGCTATGATCTTCGAAATCGTGCAGAGGTTCGCAGGCTTTTTATGGATGAAGGGAAGGCTCGATCAAGATCTCCTCAAAGAGTGCTACACCAAGGTATGAGCACTAAGGTCAATAGGGATGTCAAGAAGGGTGGATCACGAGTTCATAAGCGTCATCGTTTAGCTAGACCTGATGATTCTGATGACTCCCTTCTTGTGGATGAGTTGGATCAAGGCCCTGCTATTCCATGGAGTCGAGGTGGTAGTAGATCTGGCCCTCCTTGGCTTTTTGGGGGACTAGACATGCATGTAACCTCAAGTTGGGGATTAAATCTTGCTGCGTCTGGTTGGGGTCATCAAGGTGATGCTTTGGCTACTTTGACATCTGGAGTCCAAACTGCTGGACCAAGCTCCAAAGGAGGGGCAGATATCCAACCTTTGCAGGTTGACGACAATGTTAGTTTTGATGATATAGGTGGGCTCTCTGAATACATCGATGCTCTCAAGGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCAAGTTACCACATTACTCCACCAAGGGGGGTGTTGTTATGTGGGCCCCCTGGCACAGGAAAAACATTAATTGCTAGAGCATTGGCTTGTGCTGCTTCAAAATCTGGCCAAAAGGTTAGCTTTTACATGCGTAAAGGTGCAGATGTGTTGAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTAAAACTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCCCCTGTGAGGTCTAGTAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCCACCAACAGGATTGATGCTATTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGCTGTGAGGCACGAGCTGaaataatagatattcataCTCGCAAGTGGAAGAATCCTCCTACGAAGGAGCTGAGAAAGGAACTTGCAGCTAGTTGTGTAGGATATTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAGGCTGCCATCCGTGCTTTCCGTGAAAAATATCCACAGGTTTATACAAGTGATGATAAGTTTCTCATAGATGTTGATTCTATCAAGGTTGAAAAGTATCATTTTATTGAAGCAATGTCAACAATTACTCCTGCTGCTCACAGGGGTGCAATTGTGCACTCTAGGCCGTTTTCTCGAGTAGTTCAACCATGTCTACAACGACATCTAGAGAAAGTCATGgatattttatatgatattttcCCTCCACTTGCTGTTGCATCAGAATTGAGCAAGCTGTCAATGCTTTCCTATGGTTCTGCAATTCCACTGGTGTATCGGCCTAGGCTTCTACTTTGTGGTGGTGAAGGAACTGGGCTTGATCATCTTGGGCCTGCTGTTTTACATGAACTGGAAAAATTTCCGGTTCATTCATTAGGACTTTCATCTCTTTTATCAGATCCCAGTGCAAAGACAGCGGAGGAGGCATTGGTACATATATTTGGCGAGAGCAGAAGAATGACGCCGTCAATTCTCTATTTACCACAGTTTGATGTTTGGTGGGAAACTGCACATGAACAGCTCAGGGCTGTTCTCCTGACTTTGCTAGAAGAATTGCCATCTGACTTGCCTATCTTACTACTTGGAACGTCCTCAGTTATACTTGCTGAAGTTGATGAAGTGCCTGCTTCAGTTTTCCCTCACAGTTCAGTCTACCAAATTGACATACCATCTACTGAAGATAGGACTTCATTtttcaattgtttgatagaagCTGCTTTGTCAGTCTTGCCAGAGGGAATGAGCAGAACATCCCAGAACACAGGATCTCTGCATGAACTTCCCAAGGCACCAAAATTGGCAAGTGGTCCAAACATATCAGAGCTAAAAGCAAGGATTGAAGCTGAGCAGCATGCTTTTCGCAGAGTGCGGATGTGCCTTAGAGATATTTGTAACCGGATATTATATGACAAACGGTTTAATGCCTTCCACTATCCAGTCTTGGATGAAGATGCACCTAATTATCACTCAATTATCCAAAATCCGATGGACATGGCTACCGTGCTGCAGCATGTTGATAATGGCCACTACATTTCATGTTCAGGATTCCTGCAGGACATTGATCTTATTGTTACCAATGCAAAGGCTTACAACGGAGAAGACTACAATGGTGCTAGGATTGTCAGTAGAGCTTGTGAGCTTCGCGATGCAGTTTCTGGGATGCTATCACAGATGGATCCTGCACTGGTTGCTTactgtgacaggattgccgcccAAGGTGGCCCAGTTCATATACCTGATGAATTAAGGGGGTCTACATTCCCTTCTACTCCTGTTGTTCAATTGGGATGCACTACTAGAATGAGTGCTCGACTTCGTAATGTCCAACCAGAGGTTAATATGGATCAAAGCTATGAAGCTCGGAAGCGGACAAAGAAGAGCTCTGATGTTGCACTTCCAGAAGACAGATCACTACAAGACTCTGCAGTGTCAAAGTGTTCACAGGAACCTCAGGTGAATGATATAACTTCGGGTAGTCTAGAACCTGCCTCAATTGATGGAAATCTGCAAGGACGTTGCCATGCTGATGGGAGCAGTTCTGAAGATGTTCCAATGTCTTATGGTGAATTCTCAAGCCAAGTAGAGTATGTCAGGCAGTTTTTTGTGAAGCGTACTGAAAATTACACAATTCCGCAGCTGGAATGGCTTTACACAAGAATTATGAAGGGTGTTCTCCAAATCGAAGATAAAAGAATGGAAGATGGTCCCAATACATCAGTTTTGAGGTTTTTGTCCAAATTTGTAGAGGATGATGCAAACTTCTGA 3579 0.4236 MYPKRSSKGDGPVSRPVRTSDRIRSRPNVYGPPYLCYNANLKHSRRSKNKTRIAAAQIAKMLHPKKRPASDSNTNSASTNLRRSTRKRKLSINLEGFTDSSGSEDEDLMRPTHRPSRKQIDNSINQDELISSNCKRTMKTKPTPRREGLRPRHLKAVARELNSESDDEQDLSKEKAEQDETENENDADDDQNEIEGDTEGEDEDEDDDEGEDEEDEEGEEQDGKKRYDLRNRAEVRRLFMDEGKARSRSPQRVLHQGMSTKVNRDVKKGGSRVHKRHRLARPDDSDDSLLVDELDQGPAIPWSRGGSRSGPPWLFGGLDMHVTSSWGLNLAASGWGHQGDALATLTSGVQTAGPSSKGGADIQPLQVDDNVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKSGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEIIDIHTRKWKNPPTKELRKELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSIKVEKYHFIEAMSTITPAAHRGAIVHSRPFSRVVQPCLQRHLEKVMDILYDIFPPLAVASELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLSSLLSDPSAKTAEEALVHIFGESRRMTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVILAEVDEVPASVFPHSSVYQIDIPSTEDRTSFFNCLIEAALSVLPEGMSRTSQNTGSLHELPKAPKLASGPNISELKARIEAEQHAFRRVRMCLRDICNRILYDKRFNAFHYPVLDEDAPNYHSIIQNPMDMATVLQHVDNGHYISCSGFLQDIDLIVTNAKAYNGEDYNGARIVSRACELRDAVSGMLSQMDPALVAYCDRIAAQGGPVHIPDELRGSTFPSTPVVQLGCTTRMSARLRNVQPEVNMDQSYEARKRTKKSSDVALPEDRSLQDSAVSKCSQEPQVNDITSGSLEPASIDGNLQGRCHADGSSSEDVPMSYGEFSSQVEYVRQFFVKRTENYTIPQLEWLYTRIMKGVLQIEDKRMEDGPNTSVLRFLSKFVEDDANF 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0062 1192 MobiDBLite consensus disorder prediction 181 219 - -
Sto12g0062 1192 SMART bromo_6 891 998 IPR001487 GO:0005515
Sto12g0062 1192 Gene3D - 369 639 IPR027417 -
Sto12g0062 1192 Pfam Bromodomain 901 972 IPR001487 GO:0005515
Sto12g0062 1192 PRINTS Bromodomain signature 923 939 IPR001487 GO:0005515
Sto12g0062 1192 PRINTS Bromodomain signature 939 957 IPR001487 GO:0005515
Sto12g0062 1192 PRINTS Bromodomain signature 957 976 IPR001487 GO:0005515
Sto12g0062 1192 PANTHER AAA DOMAIN-CONTAINING 1 1187 IPR045199 -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 1 32 - -
Sto12g0062 1192 CDD AAA 407 546 - -
Sto12g0062 1192 Gene3D - 547 632 - -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 140 180 - -
Sto12g0062 1192 CDD Bromo_AAA 892 1001 - -
Sto12g0062 1192 Gene3D - 883 1011 IPR036427 GO:0005515
Sto12g0062 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 695 844 IPR027417 -
Sto12g0062 1192 PANTHER BNAC08G44480D PROTEIN 1 1187 - -
Sto12g0062 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 636 IPR027417 -
Sto12g0062 1192 SUPERFAMILY Bromodomain 893 1002 IPR036427 GO:0005515
Sto12g0062 1192 SMART AAA_5 407 548 IPR003593 -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 103 121 - -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 60 291 - -
Sto12g0062 1192 Pfam AAA+ lid domain 573 610 IPR041569 -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 220 249 - -
Sto12g0062 1192 MobiDBLite consensus disorder prediction 122 138 - -
Sto12g0062 1192 ProSiteProfiles Bromodomain profile. 914 976 IPR001487 GO:0005515
Sto12g0062 1192 MobiDBLite consensus disorder prediction 1054 1071 - -
Sto12g0062 1192 Coils Coil 173 193 - -
Sto12g0062 1192 Pfam ATPase family associated with various cellular activities (AAA) 411 546 IPR003959 GO:0005524|GO:0016887
Sto12g0062 1192 MobiDBLite consensus disorder prediction 1046 1078 - -
Sto12g0062 1192 ProSitePatterns AAA-protein family signature. 516 534 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0062 Sto-Chr12 416064 424483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0062 371 662 Calmodulin-binding Proteins AT3G56690 40.000 2.88e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0062 K22531 - gmx:100787765 1819.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0062 12 416064 424483 Sto12g0062 12 416064 424483 ECH