Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0058 ATGGGATTCTCAGTGAGAAATCTCTTAATCACCTACGCTTTGGATGTGAACCCGTGGCCACTTGGGTTTGTGTTTGAACTTGCAGTTTTCTTATCATACTTGTGGTCTCCAGTTCTGGGTCTTGGTTCCATGTCTTCCATTGCCGTATCTTATGGTGAAAAGGGTTCTGTCTTTTGTGGTCTGCGATCAGATGGGTCTCACACTGTGACCTGTTACGGATCAAACTCAGCTGTAGTGTATGGAATTCCTACCCATTTCCCACTTCTGGGTTTAACTGCAGGTGATGGCTTTGTGTGTGGACTCCTCATGGATTCTTTCCAACCTTATTGTTGGGGTAGCACTGGCTATATTGAAATGGGAGTTCCACAACCTATGACTAACGGAGCAGAGTACCTAGAAATCAGTGCTGGGGATTACCATGTGTGTGGATTGAGGAAACCCTTGACAGGAAGACACAGAAACACTTCATTAATAGATTGCTGGGGTTACAACATGACCAAGAACTATGTTTTTGATGGTCAGATTCAGTCAATCTCAGCAGGTTCTGAATTCAACTGTGGTTTGTTTTCTCAAAACAGAACTGTCTTCTGCTGGGGAGATGATACTAGCAGCAGAGTAATCAGTTTAGTTCCTAAAGACAAGAGATTCCAGAAGATTTCCGCAGGCGGGTATCATGTGTGTGGGATTCTAGAAGGGGTGAATTCCAAAACTGTTTGTTGGGGAAGGAGTTTGGGCATGGAGGAAGAAATTTCAGTGAAACATTCTGGTGAAGGAAACGTTGATTTGGCTCCAAGTGAACCCATGCTGTCTGTGGTGGGAGGAAGATTTCATGCTTGTGGCATTAAGACTTATGACCGTGGGGTGATTTGTTGGGGTTTCGTTATCAAAGGAAGCACCCCGGTTCCTAATGGGATTAAGGTGTTTGAGATTGCTGCTGGAAATTACTTCACTTGTGGAATGCTTGCTCAGAGATCTCTTGTCCCTGCTTGTTGGGGTGTTGGCTTCCCTCCTTCTCTCCCATTGGCTGTCTCACCTGGACTCTGCCAACCTAATCCATGCGCTCCTGGTTTCTATCAAGTGCAACAGAAAAAGGGTGTTTGCAAGTCTCCAAATTCTCATGTTTGCATGCCATGCAGTACTGGAGATTGTCCTGCTGAAATGTATCAGAAAAGTGAGTGCAATTATACATCTGACAGGCAATGTGAATACAACTGTTCTACTTGTTCCTCACCTGAATGCTTAGCAAATTGCTCTTCCTCGTATACCAATACTAACACGGCAAAGAAAGATGAAAAGTTTTGGTCTTTGCAGTTGCCAGTGGTTATAGCAGAGGTTGCTTTTGCTGTTTTCTTTGTTATCATTGTAACCTTAACTGCTGTTTTATATGTTCGCTACAAGCTACGAGGTTGTCGGTGTTCCATAGAAGGATCAAACTTGAAGAAACTTCAAGGGAGCAGTTCTTCCCTTCAGAAGGAGAACAGTAAGATCAGTCCAGACTTGGAGGAGCTCAAGATCAGGAGGGCTCAGATGTTCACCTATGAGGAACTGGAAAGAGCAACAGGTGGGTTCAAAGAAGAATCAATAGTTGGTAAGGGAAGTTTTTCGTGTGTATTCAAAGGTGTGTTGAAAGATGGGACTGTTGTAGCAGTTAAAAGAGCCATAATGTCACCCAACATGCAGAAGAATTCCAAAGAGTTTCACACAGAGCTGGACTTGCTCTCCAGATTAAACCATGCCCATTTGCTGAACCTCCTAGGCTATTGTGAAGAAGGTGGGGAAAGGCTGCTTGTTTATGAATTCATGGCGCATGGGTCATTGCACCAACACCTCCACGGCAAGAACAAGGTTCTGAAAGAGCACTTGGACTGGGTTAGAAGAGTGACAATTGCAGTTCAAGCAGCAAGAGGAATTGAATATTTGCATGGCTATGCTTGCCCACCTGTGATTCACAGAGACATCAAGTCATCAAACATCCTCATTGACGAAGAAAACAATGCAAGAGTTTCTGATTTTGGCTTGTCATTACTGGGTCCCGCAGATAGTAGCTCCCCATTGGCTGAACTACCCGCAGGCACACTAGGGTATCTTGATCCTGAATACTATAGGCTTCATTACCTGACCACAAAATCTGATGTGTACAGTTTTGGCGTTCTGCTGCTGGAAATTCTAAGTGGTAGAAAAGCCATAGACATGCAATATGAAGAAGGGAATATAGTAGAATGGGCAGTGCCTCTGATAAAGGCAGGAGATATAACAGCAATACTGGACCCAGTTCTGAAACCACCTTCTGATATAGAAGCGTTGAAAAGGATTGCTAACGTGGCATGTAAATGCGTGAGGATGAGAGGGAAGGAGAGGCCATCAATGGACAAGGTGACAACAGCATTGGAGAGAGCTCTAGTGCAACTAATGGGAAGCCCAAGCAAGGAGCAGCCAATATTGCCGACAGAGGTGGTGTTGGGAAGTAACAGATTACACAAGAAGTCGTCACAAAGATCTTCAAACAAGTCAGCTTCAGAGACGGATGTGGGAGAAGCAGAGGATCAAGGGTTTGAGTTCAGAGCACCGTCTTGGATAACTTTTCCTAGTGTGACTTCTTCACAGAGAAGGAAGTCGTCGGTGTCAGAGGGAGATGTTGAAGGCAAAAATTCAGAAGTGAAGAACGTGGTCGTGGGGGGAGGTGACGCTTTAAGGAGTCTTGAGGAAGAGATTGGACCTGCTTCTCCTCAGGAGAGGCTCTTCTTGCAGCATAACTTCTGA 2760 0.4482 MGFSVRNLLITYALDVNPWPLGFVFELAVFLSYLWSPVLGLGSMSSIAVSYGEKGSVFCGLRSDGSHTVTCYGSNSAVVYGIPTHFPLLGLTAGDGFVCGLLMDSFQPYCWGSTGYIEMGVPQPMTNGAEYLEISAGDYHVCGLRKPLTGRHRNTSLIDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDDTSSRVISLVPKDKRFQKISAGGYHVCGILEGVNSKTVCWGRSLGMEEEISVKHSGEGNVDLAPSEPMLSVVGGRFHACGIKTYDRGVICWGFVIKGSTPVPNGIKVFEIAAGNYFTCGMLAQRSLVPACWGVGFPPSLPLAVSPGLCQPNPCAPGFYQVQQKKGVCKSPNSHVCMPCSTGDCPAEMYQKSECNYTSDRQCEYNCSTCSSPECLANCSSSYTNTNTAKKDEKFWSLQLPVVIAEVAFAVFFVIIVTLTAVLYVRYKLRGCRCSIEGSNLKKLQGSSSSLQKENSKISPDLEELKIRRAQMFTYEELERATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKVLKEHLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEENNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKAGDITAILDPVLKPPSDIEALKRIANVACKCVRMRGKERPSMDKVTTALERALVQLMGSPSKEQPILPTEVVLGSNRLHKKSSQRSSNKSASETDVGEAEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVEGKNSEVKNVVVGGGDALRSLEEEIGPASPQERLFLQHNF 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0058 919 Gene3D Phosphorylase Kinase; domain 1 494 600 - -
Sto12g0058 919 ProSiteProfiles Protein kinase domain profile. 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0058 919 Gene3D - 88 345 IPR009091 -
Sto12g0058 919 SUPERFAMILY Protein kinase-like (PK-like) 502 796 IPR011009 -
Sto12g0058 919 MobiDBLite consensus disorder prediction 823 840 - -
Sto12g0058 919 MobiDBLite consensus disorder prediction 822 849 - -
Sto12g0058 919 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 401 IPR001368 GO:0005515
Sto12g0058 919 SMART serkin_6 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0058 919 MobiDBLite consensus disorder prediction 864 891 - -
Sto12g0058 919 SUPERFAMILY RCC1/BLIP-II 41 293 IPR009091 -
Sto12g0058 919 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Sto12g0058 919 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Sto12g0058 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Sto12g0058 919 Gene3D Transferase(Phosphotransferase) domain 1 601 810 - -
Sto12g0058 919 CDD STKc_IRAK 529 798 - -
Sto12g0058 919 PANTHER RECEPTOR-LIKE KINASE 22 919 - -
Sto12g0058 919 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 22 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0058 Sto-Chr12 389514 392273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0058 29 919 Receptor kinase-like Gene Family AT3G59420 69.154 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sto12g0058 PK_Tyr_Ser-Thr 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0058 - - gmx:100797455 1516.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0058 12 389514 392273 Sto12g0058 12 389514 392273 ECH