Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0054 ATGCTGTCTTCTCCAGAATCTGATTCATTCATTGACAACTGTCTATCTTCGGTTTCTGATAACTCTATATCTGTGGAATCAGCTTCCATGTCTGACTTATCTAAGCTTAATAGAAAATATGCAGTGTTGCTTCTGATTAGTGCAGTTAAAGTTTGGGTTTTGTTGGCTGATAATACGTTGGACACCTCTTTGATGCAGACTTGTCTTAAGGATTATACTGCACTCAGATCTTCTGTTGCTGCAGTGGAGTTTGGAATTGATGGCTCTATTAATAGTGAAATAGTAGGAAATACCACTGTGAGGGATGTTAGCAGCACAGGTGATGAAAACAAAACTGGTGGGAGTTCAGTTGAACCAACTtacaaacaagatcaagatgaTATAGTGGCTCAAGATTCTTCAGGAGGGGACACAATTCCATCTGCAATTCCTGCAGTATCAGTTGTTTCAGCGGAGGAGCCCTACGTGGGTCAAGAGTTTGAATCAGAAGCGGCAGCACATGCCTATTATAACACATATGCCACAAATGTTGGATTCATCATACGTGTTAGTAAACTCTCTCGATCAAGGCGTGATGGAACTGCCATTGGACGAGCTCTTGTTTGTAATAAAGAGGGTTACAGAATGCCTGACAAGCGTGAAAAGATCGTTAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTCAGGAAAGTCAGTTCCGGTAAATGGGTTGTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAAGGGTAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGGGAACTGTCCCAGCAGTTGGCTTTAGAGAAGAAGCGAGCTGCAACCTATAAAAGGCATCTTGAGTTGATATTTGAGCATATTGAGGAGCACAATGAGAGCCTTTCAAAGAAAATACAGCACATAGTAGACAGTGTGAAGGAGATAGAAACCAAAGACGCACAGAGTCATAGATAG 1002 0.4112 MLSSPESDSFIDNCLSSVSDNSISVESASMSDLSKLNRKYAVLLLISAVKVWVLLADNTLDTSLMQTCLKDYTALRSSVAAVEFGIDGSINSEIVGNTTVRDVSSTGDENKTGGSSVEPTYKQDQDDIVAQDSSGGDTIPSAIPAVSVVSAEEPYVGQEFESEAAAHAYYNTYATNVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLALEKKRAATYKRHLELIFEHIEEHNESLSKKIQHIVDSVKEIETKDAQSHR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0054 333 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 80 330 - -
Sto12g0054 333 Coils Coil 275 295 - -
Sto12g0054 333 Pfam FAR1 DNA-binding domain 169 255 IPR004330 -
Sto12g0054 333 MobiDBLite consensus disorder prediction 100 123 - -
Sto12g0054 333 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 80 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0054 Sto-Chr12 361564 369300 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto12g0054 FAR1 1.3e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0054 - - fve:101308536 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0054 12 361564 369300 Sto12g0054 12 361564 369300 ECH