Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0039 ATGGAGATGGAGCAGCCAAATTCTCCGGGGACTTGGCCGGTTGATCTCAGAGATTGCATCGATCAGCTCTTGAAGTTCGTTCTCGAATCTCACGCCAACCAAACCTTGGAATTCGATCTAGGGCTTCCCAGGGACTATTGCTACCATCTCCTCGCACACGATTTTGGCGATCATGTAGATGGAGATGGAGTTCCTCCCTCCCCTTTATACAAGCGTCTTGCACTAGTTTTATATGAATTAATTACTTGTACAGACTTGCGAGACAGGAATAAGGAAGACTGGAGTGAAATGCTTGTGGATAAGGGTTCTCAACTACTAAATCTTTTCAAGGCTATCAATTTTGAACTTCATGTTCAAGAGCCTTTCTTTACTCAATTAAAAGATGGGATGAAAACCATTGAAGGAAGGTGTGCTGCTGGAAATTACAAACGGATTGCTACGGGAGCTTTACTTCTTTTCAACAAATGCTTGGTACTCGAGGTTGAGGATGTTCACTCTTATACATCATTTTCTGAGATGTTGGAGGCAGAGAGTCTCCAAAAGGTCCTTCCTGGAGTGAAAACCATTGAAGAAGGTGTAAGAGTTTATCGAAAGTTTTACACAGAAGAAAAGGAGAGATCCAATGGTGTGGTAGCAATTTGTGTTACAAAACTAGCCTCTCAGCCATACCACATATTGGCTACAATAATTTCTgGTGTTTATCATGTTGTGATTGTTTGCATTGGGGTGGGAAATAGGTCAAAATGGGCGGGGAGGGTTCTGAGAGAGTGTGCTAAAGCGATCTCAGAGGGAGACTCTGCCCGAATTCAGCATCTGTTATGGATGCTCAATGAACTGGCCTCCCCTTACGGCGACTGCGATCAGAAATTAGCCTCTTACTTCCTTCAAGCCCTCTTCTGCAAAGCCACCCATTCAGGCCACAGATGCTACACCACTCTCTCCTCCCTCGCCCACAAATCCCACTCCTTCCATTCCGCCACTAACCTCATCCTCAAGTTCCAAGAGCTCACCCCCTGGACCACCTTCGGCCACGTCGCATCCAACGCCGCCATCCTCGAGGCTCTTGACGGAGAGACCAACCTCCACATCCTGGACATAAGCAACACCCTCTGCACTCAGTGGCCCACTCTGCTGGAAGCCCTCGCCACTCGCAACCACGACACTCCGCGCCTCAAGCTCACCACCGTCGTGTTGGGAATGGGAGGAGGGGGAGTGAATGTAATGAAGGAAGTGAGGCAGAGGATGGACAAGTTTGCGCGCCTCATGGGAGTGCCCTTTGAGTTGAATGTCATCAGCGGAGGAATCAAGAATCTGAGTCGAGAGGGGGTTGGGGTGCAAGAGGGGGAAGCCCTCGCTGTCAATTGCGTGGGGGCCTTCAGGAGCCTCCAACTCAACCACAGAGCACCCTTCATTCAGATGCTCAAGTCCTTCAATCCCCGCGTCCTCACTGTCGTCGAGGAAGAAGCCGATTTCACCTCCACCCAGGGCCAGGACGAGGATTTCCTCAAGGGCTTCGACGAGTGTTTGAGGTATTTCACGCTCTACTTTGAGATGTTACAAGATAGCTTTCCGGGGACCAGCAACGAGAGGCTCATGCTGGAGAGGGAGTGTTCCAGAAGCATCCTTAGGGTTTTGGCCTGCGGAGACGGAGACGAAGATAACTGTGAGAGACGAGAGAGAGGGAGACAGTGGAGCCAGAGGCTGAAGGAGGAGTTTTGTGGGCTTCCATTCAGTGATGACGTTTTGGATGATGTCAAGGCATTGCTCAAGCGATACAGAGCGGGATGGACGTTGGCTACTGCACAAGATGCACATCATAATCATGATCATGGGATTTACTTGAACTGGAAGgaccaccctgtggtttgggCTTCTGCATGGAAACCCTAG 1890 0.491 MEMEQPNSPGTWPVDLRDCIDQLLKFVLESHANQTLEFDLGLPRDYCYHLLAHDFGDHVDGDGVPPSPLYKRLALVLYELITCTDLRDRNKEDWSEMLVDKGSQLLNLFKAINFELHVQEPFFTQLKDGMKTIEGRCAAGNYKRIATGALLLFNKCLVLEVEDVHSYTSFSEMLEAESLQKVLPGVKTIEEGVRVYRKFYTEEKERSNGVVAICVTKLASQPYHILATIISGVYHVVIVCIGVGNRSKWAGRVLRECAKAISEGDSARIQHLLWMLNELASPYGDCDQKLASYFLQALFCKATHSGHRCYTTLSSLAHKSHSFHSATNLILKFQELTPWTTFGHVASNAAILEALDGETNLHILDISNTLCTQWPTLLEALATRNHDTPRLKLTTVVLGMGGGGVNVMKEVRQRMDKFARLMGVPFELNVISGGIKNLSREGVGVQEGEALAVNCVGAFRSLQLNHRAPFIQMLKSFNPRVLTVVEEEADFTSTQGQDEDFLKGFDECLRYFTLYFEMLQDSFPGTSNERLMLERECSRSILRVLACGDGDEDNCERRERGRQWSQRLKEEFCGLPFSDDVLDDVKALLKRYRAGWTLATAQDAHHNHDHGIYLNWKDHPVVWASAWKP 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0039 629 Pfam GRAS domain family 253 628 IPR005202 -
Sto12g0039 629 ProSiteProfiles GRAS family profile. 241 628 IPR005202 -
Sto12g0039 629 PANTHER PROTEIN SHORT-ROOT-LIKE 247 628 - -
Sto12g0039 629 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 247 628 IPR005202 -
Sto12g0039 629 Pfam ASCH domain 116 213 IPR007374 -
Sto12g0039 629 SMART ASCH_2 116 219 IPR007374 -
Sto12g0039 629 SUPERFAMILY PUA domain-like 113 222 IPR015947 -
Sto12g0039 629 Gene3D Hypothetical protein. 112 220 - -
Sto12g0039 629 CDD ASCH_PF0470_like 114 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0039 Sto-Chr12 286009 295280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0039 247 629 GRAS Transcription Factor Family AT4G37650 52.010 2.81e-134 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto12g0039 GRAS 6.7e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0039 - - vvi:100854487 524.628