Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0020 ATGGCAACCAATGAATCCCCACCATCTTTGGAGATATTAGTTCGAACACCCGATGAATACTCACTCTGGACTGGACCCCCCTTCCTCAATGGTCTTCCCGGGGTCAAGCTTGATAAAGTTGCTTGCTTGAATGCAAATTTTTGTGATAATGGGTCCAAACTCTTGGCGATGAAACCCGACTCTGTTGTTGTTGTCTACGATTGCGCTACCTCTCAAGAGATTAGATCTTTTAAATTACCTAATCTTGCCGCTGCTGTCCTATCCCCTTGTGGGACTTTTTTGCAAACTTTTCAAAAACCCTCAGCGCCCCAAGACAAGAATGTGACTTTATGGAAAACAGAGACTGGTGATCCTGTCTATCAACACTCCCAAAAGAACATGACAAAAACCACTTGGCCATCGATTCAATTCAGCTCTGATGAAGCTGTTGCTTGCCGGATGGCAACTAATGAGGTACAATTTTTTGACGCTGAGGATTTCTCTAAAGGAGTTATCTATCGGTTGAAAGTTCCAGGAGTTGCTGCAATTGAGCTTTCTAGAACCCCTGGGTCTCATGTAGCTGTATTTATTCCAGAGTCCAAGGGGATTCCTGCTAGTGTACAGATATTTGCTTCTGAAAAAGATTCTCAAAGTCAACCTATTGCCCGACGTAGTTTTTTCCGATGCTCAAATGTCCAACTTAGATGGAATCGTGGCTCTTCTGGACTTCTAGTGGTGGTGCAATCAGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCAAAGTTATGCTACCTGACAACTGATGGGACTCAAGAATCAGTTGTGGCTCTACGTAAAGAGGGACCTGTTCATGATGCCCAGTGGTCATATTCTGGCATGGAATTTGGTGTTTTATATGGTTTTATGCCTGCTGCTGCAACTCTGTTTACCAAGAAGGGCAAACCCCTATTTGAGATTGGTTGTGGTCCTTACAATACAATTCGATGGAACCCAAAAGGAAAATTTTTGGCTGGCTTTGGTAACTTACCTGGTGATATGGAATTCTGGGATTACGTAGAGAAGAGAAAGGTTGGGAAAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCTGATGGATGCTATTTCATGACAGCCACAACAGCTCCAAGGCTTCAAGTTGATAATGGGATCAAGATTTTCAATTGTGATGGGTCATTGTACTACGAGAAGAAGTTTGATAAGTTGTATCAGGCTGACTGGAAACCGGAGTCACCAAATAAGTTTGGTGATATTGCTGAGTTAATTAAATCTCTGGGCGCTGTAAAAGTTGAAGACAGCAAACGACCAGGTTTTATGTTGTTTTCAGGTCAAGGATCAACATCAACCAAAGCTGCGTATTGCCCACCACATGCTAAGAAGGCAGCTGCTATTCAAGCAGAGTTGTTTGGACAGGGCCCCACTGATGACCTaaacaaatcaaaattaaaattttataaCTCTGAAGAGGCTGAGAAATATTCTAGTGCAAAAGCAAGGCATACTACAAGCTTTTAG 1524 0.4226 MATNESPPSLEILVRTPDEYSLWTGPPFLNGLPGVKLDKVACLNANFCDNGSKLLAMKPDSVVVVYDCATSQEIRSFKLPNLAAAVLSPCGTFLQTFQKPSAPQDKNVTLWKTETGDPVYQHSQKNMTKTTWPSIQFSSDEAVACRMATNEVQFFDAEDFSKGVIYRLKVPGVAAIELSRTPGSHVAVFIPESKGIPASVQIFASEKDSQSQPIARRSFFRCSNVQLRWNRGSSGLLVVVQSDVDKTNQSYYGESKLCYLTTDGTQESVVALRKEGPVHDAQWSYSGMEFGVLYGFMPAAATLFTKKGKPLFEIGCGPYNTIRWNPKGKFLAGFGNLPGDMEFWDYVEKRKVGKTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFNCDGSLYYEKKFDKLYQADWKPESPNKFGDIAELIKSLGAVKVEDSKRPGFMLFSGQGSTSTKAAYCPPHAKKAAAIQAELFGQGPTDDLNKSKLKFYNSEEAEKYSSAKARHTTSF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0020 507 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 495 IPR011387 GO:0003743|GO:0006413
Sto12g0020 507 PIRSF Transl_init_eIF2A 4 506 IPR011387 GO:0003743|GO:0006413
Sto12g0020 507 Pfam Eukaryotic translation initiation factor eIF2A 217 408 IPR013979 -
Sto12g0020 507 Gene3D - 38 415 IPR015943 GO:0005515
Sto12g0020 507 SUPERFAMILY DPP6 N-terminal domain-like 42 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0020 Sto-Chr12 169112 176620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0020 51 454 Eukaryotic Initiation Factors Gene Family AT5G27640 23.059 1.65e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0020 K15026 - jre:108982788 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0020 12 169112 176620 Sto12g0020 12 169112 176620 ECH