Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0019 ATGACAGCCAGCTCCTTCTGCAATGCTGACTCTGAGTTTTCGAGAGAAGAGGGTGTAGATATTAGAAAGATGATGGAACCGAAAAGGAGCCTCTGCTCTGTCGACCAAAGCAGTTATTCCTCTATTGCGTCTAAAAGACACAAGGCTGATTTATCTATCACCACAAAGGAGAGAAAGGAGAAGTTTGGGGAACGAATAGTTGCACTGCAGCAGCTTGTTTCACCATTTGGGAAGTCAGATACAGCTTCTGTCCTTAACGAGGCAATGCACTATATAATGTTTCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTCCAATGCTCTTCAACAACCAAAATGCAGGAGATGGAGCCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCTGTGTCATATACTATTGGAGTTGCTCAGAGCAATGGAGCGGATATATGGGCCCCCATCAAGACTAGTTCTCCAGAATTTGACTAG 480 0.4417 MTASSFCNADSEFSREEGVDIRKMMEPKRSLCSVDQSSYSSIASKRHKADLSITTKERKEKFGERIVALQQLVSPFGKSDTASVLNEAMHYIMFLHKQVKVLSAPYLQCSSTTKMQEMEPYSLRSRGLCLVPVSYTIGVAQSNGADIWAPIKTSSPEFD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0019 159 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 12 147 - -
Sto12g0019 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Sto12g0019 159 Gene3D - 43 119 IPR036638 GO:0046983
Sto12g0019 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 111 IPR036638 GO:0046983
Sto12g0019 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Sto12g0019 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0019 Sto-Chr12 162581 165308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0019 24 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 57.595 2.29e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0019 - - gmx:100809747 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0019 12 162581 165308 Sto12g0019 12 162581 165308 ECH