Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0014 ATGGGCTATGTCAACACTAGAATGCGTGCGAAGAACAGTAATGCTACTGAAATGGGAAAGAAAGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCATTCACCATTCAAAGGAGAAGGTAGTCAATGATTCTGAGAAGAAAAAcacaaaggaaaagaaaaagaaaggtcTCGGAAAACTAAGGCATGGAGAGACAAATTCATTCATTCCTCTCTTCAGAGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTTGAAAGAGAGCAACAACTACTAACTTTCCGGCCTCCCACACCCCCAGAGCTACCAAAAACACCACCCTTTGTGCCTCCTAGAGCTGCTTCTCCTAGGGCACCTTCTCCAAGGGCTCCTTCTCCACAGGTTGCCTCTCCCAGGATTGTCCATCACCACAGGCCAGAACCGACGCTAAGAAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCTTATAGAGGTTATATGGCTAGGAGGAGTTTCAGAGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAATGAATGCCATGAAATACATGCAGCTGTTGGTGCGGGTTCAATCTCAGATTCAGTCTCGGAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAATACAAGAATGATAAGGATGTGGCGAGTACCTTGGGCAAGTTGACTTTGGGCCATGCTTCTGAGGCAGGTAACCATGAGGATTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGATTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATATGCGTACTCCCATCAGTTGTGGAAAGGCACTCCTACAGCTACTCAAGCACCCGTGTCGGATATTCGATCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAACGACAACTGCCGTCTTCAAATCCACAAGAAAGTCAAGTATTGAAGAATTTTCAAGTTACACCTACTAGACCATATTCAGAGCAGAAGACTAGTCCGCGGGTGGCGCCCCCAAGCAGCCATAAGATGCAGCATTATGGGTTTGATAATATGGATACAGCCACACCGAAATCCACAAAATCAGCTGTAGTAGCATCAGGGAAATCAGCAAGGAGCCCACAACTACAAGCAAACAGCTCAAAGTACTCGAGAGCTTTTGATGTGCCACTTAAGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCAAACTACATGGCTCCAACCTTATCTGCCCGAGCCAAAGTGCGTGCTAGTAGTAATCCAAGAGAGAGTCTTCCTGGCACTCCAAACAGTGAATCCAAGAGGCGACTTTCATTTCCTGGATCTCTTAAATGGTCAAAACCCTCCTTCTTCTCTACCAAGGATCCTCGGTCTCAAAGGATGCTAGATAAAAACCAGTCACTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACGGTGTCTTTACCCACAGGGGTTGGAAGAAAGCCGTTTAACAGATTTGTGTGA 1536 0.457 MGYVNTRMRAKNSNATEMGKKGSWFSAIKRVFIHHSKEKVVNDSEKKNTKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLTFRPPTPPELPKTPPFVPPRAASPRAPSPRAPSPQVASPRIVHHHRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKDVASTLGKLTLGHASEAGNHEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAYAYSHQLWKGTPTATQAPVSDIRSGGFPWWWNWLERQLPSSNPQESQVLKNFQVTPTRPYSEQKTSPRVAPPSSHKMQHYGFDNMDTATPKSTKSAVVASGKSARSPQLQANSSKYSRAFDVPLKDDDSLTSCPPFSVPNYMAPTLSARAKVRASSNPRESLPGTPNSESKRRLSFPGSLKWSKPSFFSTKDPRSQRMLDKNQSLQSLGNLSVDSTVSLPTGVGRKPFNRFV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0014 511 MobiDBLite consensus disorder prediction 333 393 - -
Sto12g0014 511 Gene3D - 144 198 - -
Sto12g0014 511 PANTHER IQ-DOMAIN 13 18 508 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 333 351 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 429 453 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 94 132 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 428 457 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 96 126 - -
Sto12g0014 511 MobiDBLite consensus disorder prediction 364 393 - -
Sto12g0014 511 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Sto12g0014 511 PANTHER IQ-DOMAIN 5-RELATED 18 508 - -
Sto12g0014 511 SMART iq_5 145 167 IPR000048 GO:0005515
Sto12g0014 511 MobiDBLite consensus disorder prediction 40 60 - -
Sto12g0014 511 Pfam IQ calmodulin-binding motif 147 167 IPR000048 GO:0005515
Sto12g0014 511 Pfam Protein of unknown function (DUF4005) 385 484 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0014 Sto-Chr12 126735 131479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0014 18 511 IQD Protein Family AT3G59690 51.812 6.91e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0014 - - jre:109014348 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0014 12 126735 131479 Sto12g0014 12 126735 131479 ECH