Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0007 ATGACCACCACTGTTCTGGGCTTCAAAATATCCATGCCAATCATGATTGCTCGAACAGCCATGCAGAAAATGGCTCACCCTGAGGCCACTCTCGCCCTTCTCACCGCCTTCATTTACTACCGTAGATACACCAATGCTAACAAACCCTCCGGATCCTCCTCAACACCCGACACTCTCCGCTTATATCCACCCAACACCGCCACTTCCGATGCCAGCACCAGCACCAACTCCCACTCCCACTTTCTCTATGGTAAATTGGGATCCCCCGAACTCAAACCGCTTCCTCCACTGCCCCGCCGTGTGAATCACGAAGATGATGCAGAGGAGGAGGAGTTCTTCTCTCCACGCGGCTCCTCAGGCCGCAGAGTGCTAGTGGACAAAATTGGAAGCTTCAATTCTGttactctatctctctcttcttcccctTCTCACTCCCTCGACTTACCCTCCTCTTCACCTCCAATCAAAATGCCCCCATATCCTCCGCCGCTTCCGCCTCCACGCTTCTGGGACCACACTCCAAAGCCCAAATTGAAACCTTTACACTGGGATAAACTTAAAGCCACCTCCGATCGTGCCATGGTTTGGGATCACTTAAAACCAACTTCTTTCCAAGTGCTTGACCCAAAGAAGTCTCACAACATAGCCATTTTGCTTAGGGCACTAAATGTAACTGTTAATGAAGTTTGCGACGCCCTCACAGAAGGCAATTGGGATATGTTGGGAACAGAACTTCTTGAAAGTTTGTTAAAGATGGCTCCAACCGAAGATGAAGAATGTAAGCTGAAGAAGTTCAAAGATGAACCACCCTCTAAGCTTGGCCCAGCTGAGAAATTTCTAAAAGTCATCATTGATATTCCTTTTGCGTTTAAGAGAGTGGACGCTATGCTCTACATTGCCAATTTTGTTTCAGAATTAGAATACCTTAGGAAGTCCTTTGAAACTTTGGAGGTTGCTTGTGAGGAATTAAGGAATAGCAGAATGTTTCTGAAGCTCCTTGAAGCAGTTCTGAGAACTGGCAACCGAATGAATGTTGGCACCAAACGCGGTGATGCACATGCATTCAAGCTGGACACACTTCTGAAGCTGGTTGATATTAAAGGCATTGATGGAAAGACTACTCTCTTGCATTTTGTTGTACAGGAAATCATCAGAACTGAAGGTTCTCGTATTTCTGGTGCTAATCATCACCAAACTGCTGAAAAACCCACGCTCCAGGATGAAGTTGAATTTAGAAAGCTTGGACTACAAGTTGTTTCAGGCTTGAATGGGGAACTGTGCAATGTGAAAAAAGTAGCTGCAATGGATTCAGACATGCTTACTAGTGATCTTACTAAACTTGCTGGGGGGATTGCAAAAGTTGCACTAGTTGTAAAATTGAATGAAGAGTCACCTTTGAGAGAAACTAGCCGAAAATTTTCAGAGTCAATGCAAGGTTTCTTGAAGAAGGCAGAGGAACAAGTTGTTTCCATTCAGGCCCTAGAGAAGAATGCTTTATCTTCAGTAAAGGAGCTAACTGAGTATTTCCATGGAAATTCTTCCAAGGAAGAAGCTCATCCATTTAGGATTTTTATGATTGTGAGGGATTTCCTATCAATACTAGATCGTGTCTGCAAGGAAGTTGGGAAAGTAAACGAAAGAACTTTGGTTGGTTTCCGGCAATATTCAATGCCTGCAAAGCACATCCTGCCAGCAAGTTTCCCTGAGATTATTAGCAAGCAGCCAGCGTCTGGTTCTTCAGATGATGAAAGCACCTCATAG 1761 0.4424 MTTTVLGFKISMPIMIARTAMQKMAHPEATLALLTAFIYYRRYTNANKPSGSSSTPDTLRLYPPNTATSDASTSTNSHSHFLYGKLGSPELKPLPPLPRRVNHEDDAEEEEFFSPRGSSGRRVLVDKIGSFNSVTLSLSSSPSHSLDLPSSSPPIKMPPYPPPLPPPRFWDHTPKPKLKPLHWDKLKATSDRAMVWDHLKPTSFQVLDPKKSHNIAILLRALNVTVNEVCDALTEGNWDMLGTELLESLLKMAPTEDEECKLKKFKDEPPSKLGPAEKFLKVIIDIPFAFKRVDAMLYIANFVSELEYLRKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTKRGDAHAFKLDTLLKLVDIKGIDGKTTLLHFVVQEIIRTEGSRISGANHHQTAEKPTLQDEVEFRKLGLQVVSGLNGELCNVKKVAAMDSDMLTSDLTKLAGGIAKVALVVKLNEESPLRETSRKFSESMQGFLKKAEEQVVSIQALEKNALSSVKELTEYFHGNSSKEEAHPFRIFMIVRDFLSILDRVCKEVGKVNERTLVGFRQYSMPAKHILPASFPEIISKQPASGSSDDESTS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0007 586 MobiDBLite consensus disorder prediction 97 116 - -
Sto12g0007 586 PANTHER FORMIN-RELATED 173 206 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto12g0007 586 PANTHER FORMIN-RELATED 74 172 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto12g0007 586 PANTHER FORMIN-RELATED 205 585 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto12g0007 586 Gene3D Formin, FH2 domain 173 551 IPR042201 -
Sto12g0007 586 MobiDBLite consensus disorder prediction 137 160 - -
Sto12g0007 586 PANTHER FORMIN-LIKE PROTEIN 2 74 172 - -
Sto12g0007 586 PANTHER FORMIN-LIKE PROTEIN 2 205 585 - -
Sto12g0007 586 PANTHER FORMIN-LIKE PROTEIN 2 173 206 - -
Sto12g0007 586 SMART it6_source 168 549 IPR015425 -
Sto12g0007 586 MobiDBLite consensus disorder prediction 48 118 - -
Sto12g0007 586 ProSiteProfiles Formin homology-2 (FH2) domain profile. 142 560 IPR015425 -
Sto12g0007 586 Pfam Formin Homology 2 Domain 201 534 IPR015425 -
Sto12g0007 586 SUPERFAMILY Formin homology 2 domain (FH2 domain) 158 547 - -
Sto12g0007 586 MobiDBLite consensus disorder prediction 48 82 - -
Sto12g0007 586 Gene3D Aldolase class I 1 42 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0007 Sto-Chr12 66698 71275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0007 142 574 FH2 protein (formin) Gene Family AT3G25500 58.861 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0007 - - gmx:100786203 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0007 12 66698 71275 Sto12g0007 12 66698 71275 ECH