Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2396 ATGGGAGCCTCCAGCAGACGTTTTAGACATCTTTTGAACCCTAGAGAACCTCTGCGAAAATTCTGTGAGTACCCTAAGAGCATTCCAAACACTGAGAGTTTTCCTATCTACGGAAACCTTGACCTACCTATTCTTTTCAAGAACAAGGGAAGACTGATGACTGTGGATGAAGAGGGTAGTAGCTCTGTGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCCATAGCAACTCATCCTGAAGATGCTTCTGATCGATGGGAGAAAATTGCAGCTGATGTACCAGGGAAAACTGTAGAAGAGATTAAACATCACTATGAGATCTTGGTTGATGATCTTAACCAGATCGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCTTCAGAGGGTTCAACAAGCCATCCTAGTGATGAAGGAGCAGGTAAGAAGGGTTCTGGGCATTATAACAGTGAGTCGAATCATGGAACTAAGGCTTCAAGATCAGATCAGGAACGACGAAAGGGAATTGCTTGGACAGAGGATGAACACAGGTTATTTCTTCTTGGCTTGGAGAAGTATGGGAAAGGTGACTGGCGAAGTATATCAAGGCACTTTGTGGTGACAAGAACGCCTACTCAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGCTTGAACTCGATGAATAAAGATAGAAGAAGATCCAGCATACATGATATCACCAGCGTGAACAATGGAGACATTTCATCACCTCAAGGACCAATCACTGGTCAAACCAATGGTTCGTCTGCGGTGACTTCTACTGGAAAACCGGCCAAGCAGGCCCCTCAAACTCCAACTGGGCCTCCCAGTGTAGGCATATACGGTGCTCCAACTATTGGGCAACCTGTAGGAGGACCCCTTGTATCTGCAGTGGGCACTCCAGTTAATCTTCCTGCCCCAGCACACATGGCGTATGGTGTCCGAGCACCGGTTCCTGGCACAGTTGTTCCCGGCGCACCAATGAACATGAGCCCGGTGCCATATCCTATGCCACACACTGCTGCTCATAGGTCGAAGATGAGTTCTAACGGTGCATGGACACTTGCGGGGATGCTTTCATTCACGATTTGCTGCGTGAATGGTCGGACCATTCACTCTCAATAG 1131 0.4686 MGASSRRFRHLLNPREPLRKFCEYPKSIPNTESFPIYGNLDLPILFKNKGRLMTVDEEGSSSVWSREQDKAFENAIATHPEDASDRWEKIAADVPGKTVEEIKHHYEILVDDLNQIESGCVPLPSYNSSSEGSTSHPSDEGAGKKGSGHYNSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRHFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISSPQGPITGQTNGSSAVTSTGKPAKQAPQTPTGPPSVGIYGAPTIGQPVGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMSPVPYPMPHTAAHRSKMSSNGAWTLAGMLSFTICCVNGRTIHSQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2396 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 221 IPR017930 -
Sto11g2396 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 219 IPR006447 GO:0003677
Sto11g2396 376 SUPERFAMILY Homeodomain-like 62 118 IPR009057 -
Sto11g2396 376 SMART sant 169 219 IPR001005 -
Sto11g2396 376 SMART sant 60 112 IPR001005 -
Sto11g2396 376 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 59 334 - -
Sto11g2396 376 PANTHER TRANSCRIPTION FACTOR KUA1 59 334 - -
Sto11g2396 376 SUPERFAMILY Homeodomain-like 167 222 IPR009057 -
Sto11g2396 376 Pfam Myb-like DNA-binding domain 172 217 IPR001005 -
Sto11g2396 376 Pfam Myb-like DNA-binding domain 63 106 IPR001005 -
Sto11g2396 376 CDD SANT 64 106 IPR001005 -
Sto11g2396 376 Gene3D - 171 223 - -
Sto11g2396 376 ProSiteProfiles Myb-like domain profile. 165 217 IPR001005 -
Sto11g2396 376 MobiDBLite consensus disorder prediction 234 276 - -
Sto11g2396 376 ProSiteProfiles Myb-like domain profile. 56 110 IPR001005 -
Sto11g2396 376 MobiDBLite consensus disorder prediction 227 284 - -
Sto11g2396 376 CDD SANT 172 217 IPR001005 -
Sto11g2396 376 ProSiteProfiles SANT domain profile. 173 221 IPR017884 -
Sto11g2396 376 MobiDBLite consensus disorder prediction 121 137 - -
Sto11g2396 376 MobiDBLite consensus disorder prediction 121 169 - -
Sto11g2396 376 Gene3D - 55 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2396 Sto-Chr11 23209913 23236722 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g2396 Myb_DNA-binding 5.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2396 - - pvy:116143636 513.842