Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto11g2338 | ATGTCATTGTTGCAGAATGGTTCAGCTTATGTTCGAGTATTTGTTGATGTTTTGCGTGATATCTTTAAAGAGGAGATTGTAAAATATGATTTGACTATAATTGATGAAATGCTAACAGCAAACCCAAAAAGAGTTAGATTGTTTCACTTTCGAATGAAGATACCCATGAACCTTTCTTGA | 180 | 0.3278 | MSLLQNGSAYVRVFVDVLRDIFKEEIVKYDLTIIDEMLTANPKRVRLFHFRMKIPMNLS | 59 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto11g2338 | 59 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT H | 5 | 50 | IPR004908 | GO:0000221|GO:0046961|GO:1902600 | |
| Sto11g2338 | 59 | SUPERFAMILY | ARM repeat | 5 | 52 | IPR016024 | - | |
| Sto11g2338 | 59 | Pfam | V-ATPase subunit H | 4 | 49 | IPR004908 | GO:0000221|GO:0046961|GO:1902600 | |
| Sto11g2338 | 59 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT H | 5 | 50 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto11g2338 | Sto-Chr11 | 22527121 | 22527378 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto11g2338 | 3 | 49 | Primary Pumps ATPases(2) | AT3G42050 | 63.830 | 6.91e-15 | 64.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto11g2338 | K02144 | - | twl:119979993 | 72.7886 |