Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2265 atgatGATGGGTGGAGGAGGAGAGGTGATTGAAGAGAAATCAAGGGACGAGATGGCGTCATCGTCATCGGGAACGGGATTCTGCTACTCCGAAGTGACGACGGCGATTAACCAGACCCATATGGCGGCGGGCGGGTTCGTATCCGACCCGGATATGTTCAACCTCACCACAAGTATGGACATGATAGGCTTCACCAACGCCAAGAATCATCATCACTTCAACGACCACGATTCTTCTTCTTCCGCTGCCGCTGCCGCTGCTGCCGCCACCTGGCAAGATCACAACCGTTTACTTGTGGATGACTCTTCTTTCAGATGCGTCTTCCCTTGCGAAGGCAACGAAAGGCCCAGCCAAggcctctctctttctctcagcTCCACCAATCCCTTAAGCATCGGCTTGCAATCTTTTGAACTCAGACACAGTACTAccaacaaccaccaccaccaccatcatcttCATCCTCATGATCATTCAGATTTCTTTTCTTCATCGAGTAGTGGTAGAGAAAAGTTGTTGGGAAAATCGGTGAATATTCCTGCAGatgctaataataataataataacaatcttTATCAGCCGCATTATGCGCTCAGGAACTCCAAGTATTTGGCCCCAGCTCAGCAACTTCTCAACGAGTTTTGCTGCCTCGGAACGAAGCAAAGCGCCGATCATCACGCTGCGAAGCAGCCGAAGTCGGCGAGTCATCAGAAGAACAACAAGCCGTGGGAAGACGAAGATAACGGCGGCTGCGGTAAGAAGCATCATCCCGTGGAGAGGAGGTACAGGCACTATTGCAGTCAAATGAAGGGGGTGGTGTCATCGTTCGAAGCCGTGGCCGGGAACGGGGCGGCGAGGGTGTACTCGGCGCTGGCGCTGAAGGCAATGTCTCGGCATTTTAGGTGTTTGAAGGATGGGATATTGGGAGAGATAGAGAAGACGAGGAGGAGCATGGGCGAGAAGGATCCGGTCGCTCCGGGCACCACGAAAGGTGAGACACCGAGACTCAGGATCATAGACCAAACCCTGAGACAACAAAGGGCGTTCCAACAAATGAACATGATGGAATCTCACCCTTGGAGACCCCAGCGTGGCCTTCCCGAGCGTTCCGTCTCTCTCCTTCGCGCTTGGCTTTTCGAGCATTTTCTTCATCCGTACGTCTCAAATTGGTTCATTAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAGTGAAGGAGTATGAGCAggagaacaacaacaacaacaacaacatgaACGACGACGACGTCGTCATGGGTTCCTCGGACCATGCCGCCGTGGACGACGAGGTTGGCGGCAACACGCGGCGAAATGTCCTCGTCGTCGACGTAAGCGCAGACCAGAAGCCGATACAAGACCACCGGCGATTGCTCCGAATCGACTCCGACTGCGCCGTGTCATCcatcatcaacaacaacaacatgaATAATCATCACCCAACACCACCaacagcaacaacaacaacgtTAGTGACTGACCAGAAATGCTCATTCGGATGCGTGGAGCTCGATTTTTCATCGTACAATAGGAACGACGACGACGATGGTGGTGATGGGAATTTGATGAGGAACAACAttaatggtggtggtggtggtggtgtgtCATTGACGCTAGGGTTACAGCAAGATCAAGACGGAGAGAATAATGGGGTGAGCTTGGCGTTTCATGCTCCACcaacacatcatcatcatcatcatcatcatcagcatcATCAAAACCAGGGTTCCATATTCTTCGGAAGGGACCAAATGGAAGAGTGTCAAGTAGGTGGAATAGTTCATCAGTACACACTTTTGGATGCTGAACCGCAAAATCTTCCATACAGGAATTTGATGGGGGCACAGTTGCTCCATGACCTTGCAGGATAG 1908 0.4623 MMMGGGGEVIEEKSRDEMASSSSGTGFCYSEVTTAINQTHMAAGGFVSDPDMFNLTTSMDMIGFTNAKNHHHFNDHDSSSSAAAAAAAATWQDHNRLLVDDSSFRCVFPCEGNERPSQGLSLSLSSTNPLSIGLQSFELRHSTTNNHHHHHHLHPHDHSDFFSSSSSGREKLLGKSVNIPADANNNNNNNLYQPHYALRNSKYLAPAQQLLNEFCCLGTKQSADHHAAKQPKSASHQKNNKPWEDEDNGGCGKKHHPVERRYRHYCSQMKGVVSSFEAVAGNGAARVYSALALKAMSRHFRCLKDGILGEIEKTRRSMGEKDPVAPGTTKGETPRLRIIDQTLRQQRAFQQMNMMESHPWRPQRGLPERSVSLLRAWLFEHFLHPYVSNWFINARVRLWKPMVEEMYMEEVKEYEQENNNNNNNMNDDDVVMGSSDHAAVDDEVGGNTRRNVLVVDVSADQKPIQDHRRLLRIDSDCAVSSIINNNNMNNHHPTPPTATTTTLVTDQKCSFGCVELDFSSYNRNDDDDGGDGNLMRNNINGGGGGGVSLTLGLQQDQDGENNGVSLAFHAPPTHHHHHHHHQHHQNQGSIFFGRDQMEECQVGGIVHQYTLLDAEPQNLPYRNLMGAQLLHDLAG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2265 635 Pfam Associated with HOX 198 246 IPR006563 -
Sto11g2265 635 Pfam Associated with HOX 258 307 IPR006563 -
Sto11g2265 635 MobiDBLite consensus disorder prediction 226 255 - -
Sto11g2265 635 Gene3D - 389 424 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 387 566 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 258 386 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 15 248 - -
Sto11g2265 635 SUPERFAMILY Homeodomain-like 361 408 IPR009057 -
Sto11g2265 635 Coils Coil 404 424 - -
Sto11g2265 635 MobiDBLite consensus disorder prediction 238 255 - -
Sto11g2265 635 MobiDBLite consensus disorder prediction 1 23 - -
Sto11g2265 635 MobiDBLite consensus disorder prediction 144 167 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 15 248 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 258 386 - -
Sto11g2265 635 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 387 566 - -
Sto11g2265 635 SMART prehox3 192 309 IPR006563 -
Sto11g2265 635 Gene3D - 338 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2265 Sto-Chr11 21675248 21679273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2265 93 634 Homeobox Transcription Factor Family AT5G41410 37.601 1.35e-95 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2265 - - cit:102619980 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2265 11 21675248 21679273 Sto11g2265 11 21675248 21679273 ECH