Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2244 atgggtCGTCACCATTCATGCTGCAACCAACAGAAGGTTAAAAGAGGGCTCTGGTCTCCTGAGGAAGATGACAAACTCATTCGATACATTTCCACTCATGGCTATGGCTCCTGGAGTGAGGTTCCTCACAAAGCTGggcTTCAAAGGTGTGGCAAGAGTTGTAGGCTAAGGTGGATTAATTATCTGAGGCCTGATATTAGAAGAGGCAGGTTTACGCCTGAGGAGGAGAAGCTTATTATAAACCTTCATTCCCTCGTAGGCAACAgATGGGCTCACATAGCAAGTCACTTGCCCGGTAGAACCGACAACGAAATAAAGAATTATTGGAATTCTTggatcaaaaagaaaataagatcgTCATCAAAGCCTAATCATCATGATTTCCTGCCTTCAACCAACACTACCACTGCACAACAAATAATGACTGATAATATTGTTTTGGATCATAATAATTCCCAATTCAATTGTCACCCCAATCAACTAGACTACTTCCCAACCCAACATAATAAATTCATTACACCAAGGCCACCTCCACTACTTCAAGAACCCTTATTTATGTTTGACACTTCCACCTCCACTACTACTATTTCTTCTTTTCCACTAGATCATGCAAGTATGGAGAACACTAGTAGTACTGCACGACCACCATTGTTCCAAGATAGTGTGAGCTTGATCATGAGCTCTGAGAATTGGAATTCGAGgcaccatcatcatcatgatcatGATGAACTCCGAGGCTTTCCTGTTCCGAGTATGGACACTACTAATGCAAGTGCAAGTTATAATATGGAAATGGCAGCACCCTTTATGGAGGAGGAAGCACAAGATTTGAATATTGACGTCCTATTCTGGGATAATGTCAATAACGTTAGTGGGGAAGAGGAAGATCATAACATTATTGCACCGAATTCTTCATCAAATAATGCACTACTACTTTCTTGTTTGCCTTCCCCTTTCTGA 960 0.3917 MGRHHSCCNQQKVKRGLWSPEEDDKLIRYISTHGYGSWSEVPHKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIINLHSLVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRSSSKPNHHDFLPSTNTTTAQQIMTDNIVLDHNNSQFNCHPNQLDYFPTQHNKFITPRPPPLLQEPLFMFDTSTSTTTISSFPLDHASMENTSSTARPPLFQDSVSLIMSSENWNSRHHHHHDHDELRGFPVPSMDTTNASASYNMEMAAPFMEEEAQDLNIDVLFWDNVNNVSGEEEDHNIIAPNSSSNNALLLSCLPSPF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2244 319 CDD SANT 18 62 IPR001005 -
Sto11g2244 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Sto11g2244 319 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Sto11g2244 319 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Sto11g2244 319 PANTHER MYB DOMAIN PROTEIN 55 4 277 - -
Sto11g2244 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Sto11g2244 319 PANTHER MYB TRANSCRIPTION FACTOR 4 277 - -
Sto11g2244 319 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Sto11g2244 319 SMART sant 67 115 IPR001005 -
Sto11g2244 319 SMART sant 14 64 IPR001005 -
Sto11g2244 319 Gene3D - 70 142 - -
Sto11g2244 319 Gene3D - 7 67 - -
Sto11g2244 319 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Sto11g2244 319 CDD SANT 70 113 IPR001005 -
Sto11g2244 319 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2244 Sto-Chr11 21468386 21470513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2244 1 190 MYB Transcription Factor Family AT1G63910 63.942 2.95e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g2244 Myb_DNA-binding 4.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2244 K09422 K02947 gmx:100803556 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2244 11 21468386 21470513 Sto11g2244 11 21468386 21470513 ECH