Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2210 ATGGAGCAGAAAAGCTTATTGATATCGGCGTTGAGTGTTGGTGTGGGAGTTGGAGTGGGGATTGGCTTGGCCTCTGGACAAAACGTAGGCAATTGGGGAAGTAATTCTTGTTCCTCAAATGCCTATCTTACTGCCGAGAAAATAGAGCAGGAAATGCTTCGACTAGTTGTTGATGGCAGAGAGAGCAAGGTCACTTTCGATAAATTCCCTTATTACCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCTGAAGTCTCTAAATTTACACGTAATCTTTCTCCTGCAAGTCGGACTATTTTACTTTCTGGGCCAGCAGAACTTTATCAGCAGGTGCTAGCCAAGGCTTTAGCTCATTTCTTTGAGGCAAAGTTGCTTCTGTTAGATTTAACTGATTTTTCGTTGAAGATTCAGAGTAAATATGGGTCTGCCACCAAAGATTCCCCATTCAAAAGGTCCCCTTCGGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGGGTCATTTTCAATCTTTCCCCAAAGAGAAGAACCTAAAGGAAAAATGCACAGGCAAAGCAGTGGAGTAGACCTCCGTTCAATGGGGACTGAAGGATCTTGTAATCCTCCTAGGCTTCGTAGGAACGCTTCTGCCTCTGCAAATATCAGTAGCCTTGCTGCGCAAAGCAATCCTACTAATTCAGCTCCTCTTAAGCGCACAACCAGCTGGTCTTTCGATGAAAAGGTTCTTATACAATCACTTTACAAGGTTCTGGTTTTTGTGTCAAAAACCTATCCTATTGTTCTGTATCTGCGGGATGTTGATAAGCTGTTCTATAGATCACAAAGGGCTTATAAGTTGTTCCAGAGAATGTTGGAGAGACTATCTGGACCAGTTTTGATTCTTGGTTCTCGAGTTTTGGATTCTGCTCATGACTACAGAGAGGAGGATGAGAAACTTGCTTCACTCTTCCCATACAACATAGAAATTAGACCTCCAGAAGATGAATCACATCTTATAAGCTGGAAGTCTCAACTGGAAGAGGatatgaaaaagataaaggTCCAGGATAACAAAAACCACATTATGGAAGTACTTGCAGCCAATGACCTTGATTGTGATGAGCTAGATTCCATCTGTGTTGCAGACACAATGGTTCTCAGTAATTATATAGAAGAGATTGTAGTATCAGCAATTTCTTATCATTTAATGAAAAACAGAGACCCAGAATACAGAAATGGCAAACTGGTTATTTCATGCAATAGTTTATCCCAAGCATTAGGTATATTCCAGGAGGGGAAATCCAATGGAAGAGATACATTAAAATTGGAAGCTCAAGCTTTGAAATCTGAGAAGGAGAAAGGAGAAGGAGCTGCTGTCAAACCCGAAGCAAAATCTGAAAATGCGGCTCCTCCTGAAAAGAAAGCCGAAGCAGAAAAACCTACTTCAGTGGGAAAGCCAGAGAATGAAAATTCAGTTCCAGAACCCAAAGCTCCTGAAGTTCCTCCTGATAATGAATTTGAGAAACGAATAAGGCCCGAGGTAATACCAGCAAATGAGTTAAGTGTAACATTCACTGATATTGGTGCCTTAGATGAGATCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCACTTCGAAGGCCAGACCTTTTCACTGGAGGCCTTTTGAAGCCTTGTAGAGGAATATTGCTTTTTGGACCTCCTGGCACAGGGAAGACAATGCTGGCAAAGGCCATTGCGAAGGAGGCCGGAGCAAGTTTCATTAATGTGTCCATGTCTACCATTACCTCCAAATGGTTTGGAGAAGATGAAAAGAATGTTCGAGCTTTATTCACACTGGCAGCCAAGGTGTCCCCAACTATTATATTTGTGGACGAGGTTGATAGCATGCTCGGGCAGCGAACCAGGGTTGGAGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTCATGAGCCATTGGGACGGGCTTATGACAAGACCAGGGGAGCGCATCCTTGTTCTTGCTGCCACCAATAGGCCATTTGATCTGGATGAAGCAATTATTAGGCGATTTGAAAGGAGAATTATGGTAGGCCTGCCAGCCGTGGAGAACAGGGAAAAGATTATGAGGACTCTTTTGTCCAAAGAGAAGGTGGACGATCAACTTGACTTTAAGGAGCTAGCAACTATGACCGAAGGATACAGTGGAAGTGATCTAAAGAACTTATGCACAACTGCGGCTTATAGGCCTGTTCGAGAGTTAATTCAGAAAGAGAGATTGAAGACTCAGGTAACACTGCAATTATTTTCATTGTCAAGCTCTTCTGTGAATCTCAATGagaaaaagaaaaaagcagcCGAAGAACAGAATAAAGATGCTGTGGATGCAGAGGAGGAAGTCCAACAGGAGAAAGTTATTTCCCTTAGGCCATTGAACATGCAGGATTTCAGAGAGGCCAAGAGTCAGGTTGCCGCAAGCTTTGCAGCTGAGGGAGCAGGAATGGGTGAGTTGAAGCAGTGGAACGACTTGTATGGGGAGGGTGGTTCAAGGAAGAAACAGCAATTATCTTACTtcctatga 2568 0.4245 MEQKSLLISALSVGVGVGVGIGLASGQNVGNWGSNSCSSNAYLTAEKIEQEMLRLVVDGRESKVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHFFEAKLLLLDLTDFSLKIQSKYGSATKDSPFKRSPSESTLERLSGLFGSFSIFPQREEPKGKMHRQSSGVDLRSMGTEGSCNPPRLRRNASASANISSLAAQSNPTNSAPLKRTTSWSFDEKVLIQSLYKVLVFVSKTYPIVLYLRDVDKLFYRSQRAYKLFQRMLERLSGPVLILGSRVLDSAHDYREEDEKLASLFPYNIEIRPPEDESHLISWKSQLEEDMKKIKVQDNKNHIMEVLAANDLDCDELDSICVADTMVLSNYIEEIVVSAISYHLMKNRDPEYRNGKLVISCNSLSQALGIFQEGKSNGRDTLKLEAQALKSEKEKGEGAAVKPEAKSENAAPPEKKAEAEKPTSVGKPENENSVPEPKAPEVPPDNEFEKRIRPEVIPANELSVTFTDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTRPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKIMRTLLSKEKVDDQLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQKERLKTQVTLQLFSLSSSSVNLNEKKKKAAEEQNKDAVDAEEEVQQEKVISLRPLNMQDFREAKSQVAASFAAEGAGMGELKQWNDLYGEGGSRKKQQLSYFL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2210 855 MobiDBLite consensus disorder prediction 451 485 - -
Sto11g2210 855 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 855 - -
Sto11g2210 855 MobiDBLite consensus disorder prediction 184 214 - -
Sto11g2210 855 CDD AAA 562 695 - -
Sto11g2210 855 Coils Coil 772 802 - -
Sto11g2210 855 Gene3D - 523 793 IPR027417 -
Sto11g2210 855 ProSitePatterns AAA-protein family signature. 667 686 IPR003960 GO:0005524|GO:0016887
Sto11g2210 855 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 855 - -
Sto11g2210 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 755 IPR027417 -
Sto11g2210 855 MobiDBLite consensus disorder prediction 776 795 - -
Sto11g2210 855 SMART AAA_5 560 697 IPR003593 -
Sto11g2210 855 Pfam AAA+ lid domain 718 753 IPR041569 -
Sto11g2210 855 MobiDBLite consensus disorder prediction 451 514 - -
Sto11g2210 855 Pfam ATPase family associated with various cellular activities (AAA) 564 694 IPR003959 GO:0005524|GO:0016887
Sto11g2210 855 Gene3D - 696 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2210 Sto-Chr11 21068159 21073990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2210 558 763 Calmodulin-binding Proteins AT3G56690 32.057 1.06e-30 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2210 - - gmx:100807464 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2210 11 21068159 21073990 Sto11g2210 11 21068159 21073990 ECH